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#!/bin/bash

# run_notbooks.sh - run Jupyter notebooks

# RMM, 26 Jan 2021

# This script runs all of the Jupyter notebooks to make sure that there

# are no errors.

# Keep track of files that generate errors

notebook_errors=""

# Go through each Jupyter notebook

for example in *.ipynb; do

echo "Running ${example}"

if ! jupyter nbconvert --to notebook --execute ${example}; then

notebook_errors="${notebook_errors} ${example}"

done

# Get rid of the output files

rm *.nbconvert.ipynb

# List any files that generated errors

if [ -n "${notebook_errors}" ]; then

echo These examples had errors:

echo "${notebook_errors}"

exit 1

else

echo All examples ran successfully