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GeezerVison is showing github.com — pgvector-python/pgvector/sparsevec.py at master · pgvector/pgvector-python Expand file tree/ Copy pathsparsevec.pyMore file actions 213 lines (164 loc) · 6.91 KB / Copy pathsparsevec.pyFile metadata and controls213 lines (164 loc) · 6.91 KB 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 from __future__ import annotations from struct import pack, unpack_from from typing import TYPE_CHECKING, Final, cast, overload from ._utils import is_sparse_array, ndarray if TYPE_CHECKING: import numpy as np from scipy.sparse import sparray, spmatrix, coo_array, coo_matrix class Sentinel: pass NO_DEFAULT: Final[Sentinel] = Sentinel() class SparseVector: _dim: int _indices: list[int] _values: list[float] @overload def __init__(self, value: dict[int, float], dimensions: int, /) -> None: ... @overload def __init__(self, value: list[float] | ndarray | sparray | spmatrix, /) -> None: ... def __init__( self, value: dict[int, float] | list[float] | ndarray | sparray | spmatrix, dimensions: int | Sentinel = NO_DEFAULT, / ) -> None: if is_sparse_array(value): if dimensions is not NO_DEFAULT: raise ValueError('extra argument') self._from_sparse(value) # type: ignore elif isinstance(value, dict): if dimensions is NO_DEFAULT: raise ValueError('missing dimensions') self._from_dict(value, dimensions) # type: ignore else: if dimensions is not NO_DEFAULT: raise ValueError('extra argument') self._from_dense(value) # type: ignore def __repr__(self) -> str: elements = dict(zip(self._indices, self._values)) return f'SparseVector({elements}, {self._dim})' def __eq__(self, other: object, /) -> bool: if not isinstance(other, self.__class__): return NotImplemented return self._dim == other._dim and self._indices == other._indices and self._values == other._values def dimensions(self) -> int: return self._dim def indices(self) -> list[int]: return self._indices def values(self) -> list[float]: return self._values def to_coo(self) -> coo_array: from scipy.sparse import coo_array coords = ([0] * len(self._indices), self._indices) return coo_array((self._values, coords), shape=(1, self._dim)) def to_list(self) -> list[float]: vec = [0.0] * self._dim for i, v in zip(self._indices, self._values): vec[i] = v return vec def to_numpy(self) -> np.ndarray[tuple[int, ...], np.dtype[np.float32]]: import numpy as np vec = np.zeros(self._dim, dtype=np.float32) for i, v in zip(self._indices, self._values): vec[i] = v return vec def to_text(self) -> str: elements = ','.join([f'{int(i) + 1}:{float(v)}' for i, v in zip(self._indices, self._values)]) return f'{{{elements}}}/{int(self._dim)}' def to_binary(self) -> bytes: nnz = len(self._indices) return pack(f'>iii{nnz}i{nnz}f', self._dim, nnz, 0, *self._indices, *self._values) def _from_dict(self, d: dict[int, float], dim: int) -> None: elements = [(i, v) for i, v in d.items() if v != 0] elements.sort() self._dim = int(dim) self._indices = [int(v[0]) for v in elements] self._values = [float(v[1]) for v in elements] # TODO uncomment in 0.6.0 # self._validate() def _from_sparse(self, arr: sparray | spmatrix, /) -> None: value: coo_array | coo_matrix = arr.tocoo(copy=False) # type: ignore # has_canonical_format added in scipy 1.12+ if not hasattr(value, 'has_canonical_format') or not value.has_canonical_format: value = value.copy() value.sum_duplicates() shape = cast(tuple[int, ...], value.shape) if len(shape) == 1: self._dim = shape[0] elif len(shape) == 2 and shape[0] == 1: self._dim = shape[1] else: raise ValueError('expected ndim to be 1') if hasattr(value, 'coords'): # scipy 1.13+ indices = value.coords[-1].tolist() else: indices = value.col.tolist() elements = [(i, v) for i, v in zip(indices, value.data) if v != 0] # has_canonical_format added in scipy 1.12+ if not hasattr(value, 'has_canonical_format') or not value.has_canonical_format: elements.sort() self._indices = [v[0] for v in elements] self._values = [float(v[1]) for v in elements] def _from_dense(self, value: list[float] | ndarray, /) -> None: self._dim = len(value) self._indices = [] self._values = [] for i, v in enumerate(value): v = float(v) if v != 0: self._indices.append(i) self._values.append(v) def _validate(self) -> None: if self._dim < 0: raise ValueError('sparsevec cannot have negative dimensions') if any(i < 0 or i >= self._dim for i in self._indices): raise ValueError('sparsevec index out of bounds') def _validate_sorted(self) -> None: for i in range(len(self._indices) - 1): if self._indices[i] >= self._indices[i + 1]: raise ValueError('sparsevec indices must be in ascending order') @classmethod def from_text(cls, value: str, /) -> SparseVector: elements, dim = value.split('/', 2) indices: list[int] = [] values: list[float] = [] # split on empty string returns single element list if len(elements) > 2: for e in elements[1:-1].split(','): i, v = e.split(':', 2) indices.append(int(i) - 1) values.append(float(v)) return cls._from_parts(int(dim), indices, values) @classmethod def from_binary(cls, value: bytes | bytearray | memoryview, /) -> SparseVector: dim, nnz, unused = unpack_from('>iii', value) if len(value) != 12 + 8 * nnz: raise ValueError('invalid length') if unused != 0: raise ValueError('expected unused to be 0') indices = list(unpack_from(f'>{nnz}i', value, 12)) values = list(unpack_from(f'>{nnz}f', value, 12 + nnz * 4)) return cls._from_parts(dim, indices, values) @classmethod def _from_parts(cls, dim: int, indices: list[int], values: list[float], /) -> SparseVector: vec = cls.__new__(cls) vec._dim = dim vec._indices = indices vec._values = values # TODO uncomment in 0.6.0 # vec._validate() # vec._validate_sorted() return vec @classmethod def _to_db(cls, value: list[float] | ndarray | sparray | spmatrix | SparseVector | None, /) -> str | None: if value is None: return value if not isinstance(value, SparseVector): value = cls(value) return value.to_text() @classmethod def _from_db(cls, value: str | SparseVector | None, /) -> SparseVector | None: if value is None or isinstance(value, SparseVector): return value return cls.from_text(value) |
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