Description

stonebig

opened on Jul 26, 2020

Issue body actions

  - on scipy-1.5.2 + numpy-1.18.5 + python-3.8.5:
    - import scipy;scipy.test() 

-- Docs: https://docs.pytest.org/en/latest/warnings.html
=========================== short test summary info ===========================
FAILED linalg/tests/test_decomp_cossin.py::test_cossin[True-100-50-50-float32]
FAILED linalg/tests/test_decomp_cossin.py::test_cossin[False-40-12-20-float32]
FAILED linalg/tests/test_decomp_cossin.py::test_cossin[False-100-50-50-float32]
FAILED optimize/_trustregion_constr/tests/test_projections.py::TestProjections::test_iterative_refinements_dense
FAILED special/tests/test_exponential_integrals.py::TestExp1::test_branch_cut
FAILED special/tests/test_mpmath.py::test_expi_complex - AssertionError:
= 6 failed, 25012 passed, 2458 skipped, 10989 deselected, 76 xfailed, 6 xpassed, 4 warnings in 1177.17s (0:19:37) =
False

    - import numpy;numpy.test()

9874 passed, 372 skipped, 180 deselected, 17 xfailed, 1 xpassed in 209.94s (0:03:29)
True

Activity

1. stonebig commented on Jul 26, 2020

   

   stonebig

   on Jul 26, 2020

   ContributorAuthor

   More actions

     - on scipy-1.5.2 + numpy-1.19.1 + python-3.8.5:
       - import scipy;scipy.test() 
   

   -- Docs: https://docs.pytest.org/en/latest/warnings.html
   =========================== short test summary info ===========================
   FAILED linalg/tests/test_decomp_cossin.py::test_cossin[True-40-12-20-float32]
   FAILED linalg/tests/test_decomp_cossin.py::test_cossin[True-100-50-50-float32]
   FAILED linalg/tests/test_decomp_cossin.py::test_cossin[False-100-50-50-float32]
   FAILED optimize/_trustregion_constr/tests/test_projections.py::TestProjections::test_iterative_refinements_dense
   FAILED special/tests/test_exponential_integrals.py::TestExp1::test_branch_cut
   FAILED special/tests/test_mpmath.py::test_expi_complex - AssertionError:
   = 6 failed, 25012 passed, 2458 skipped, 10989 deselected, 76 xfailed, 6 xpassed, 14 warnings in 1154.18s (0:19:14) =

       - import numpy;numpy.test()
   

   ================================== FAILURES ===================================
   ____________________ TestSystemInfoReading.test_overrides _____________________

   self = <numpy.distutils.tests.test_system_info.TestSystemInfoReading object at 0x0000025800448760>

   def test_overrides(self):
       previousDir = os.getcwd()
       cfg = os.path.join(self._dir1, 'site.cfg')
       shutil.copy(self._sitecfg, cfg)
       try:
           os.chdir(self._dir1)
           # Check that the '[ALL]' section does not override
           # missing values from other sections
           info = mkl_info()
           lib_dirs = info.cp['ALL']['library_dirs'].split(os.pathsep)
           assert info.get_lib_dirs() != lib_dirs
   
           # But if we copy the values to a '[mkl]' section the value
           # is correct
           with open(cfg, 'r') as fid:
               mkl = fid.read().replace('ALL', 'mkl')
           with open(cfg, 'w') as fid:
               fid.write(mkl)
           info = mkl_info()
           assert info.get_lib_dirs() == lib_dirs
   
           # Also, the values will be taken from a section named '[DEFAULT]'
           with open(cfg, 'r') as fid:
               dflt = fid.read().replace('mkl', 'DEFAULT')
           with open(cfg, 'w') as fid:
               fid.write(dflt)
           info = mkl_info()
   

         assert info.get_lib_dirs() == lib_dirs
   

   E AssertionError: assert [] == ['C:\Users\...\tmpyy_rrfob']
   E Right contains 2 more items, first extra item: 'C:\Users\helene\AppData\Local\Temp\tmplzhqlf_t'
   E Full diff:
   E [
   E + ,
   E - 'C:\Users\helene\AppData\Local\Temp\tmplzhqlf_t',
   E - 'C:\Users\helene\AppData\Local\Temp\tmpyy_rrfob',
   E ]

   cfg = 'C:\Users\helene\AppData\Local\Temp\tmplzhqlf_t\site.cfg'
   dflt = '\n[DEFAULT]\nlibrary_dirs = C:\Users\helene\AppData\Local\Temp\tmplzhqlf_t;C:\Users\helene\AppData\Local\T...ta\Local\Temp\tmplzhqlf_t\libfoo.so\nlibraries = C:\Users\helene\AppData\Local\Temp\tmpyy_rrfob\libbar.so\n'
   fid = <_io.TextIOWrapper name='C:\Users\helene\AppData\Local\Temp\tmplzhqlf_t\site.cfg' mode='w' encoding='cp1252'>
   info = <numpy.distutils.system_info.mkl_info object at 0x0000025800448E50>
   lib_dirs = ['C:\Users\helene\AppData\Local\Temp\tmplzhqlf_t', 'C:\Users\helene\AppData\Local\Temp\tmpyy_rrfob']
   mkl = '\n[mkl]\nlibrary_dirs = C:\Users\helene\AppData\Local\Temp\tmplzhqlf_t;C:\Users\helene\AppData\Local\Temp...ta\Local\Temp\tmplzhqlf_t\libfoo.so\nlibraries = C:\Users\helene\AppData\Local\Temp\tmpyy_rrfob\libbar.so\n'
   previousDir = 'C:\WinP\bd38\bucod\WPy64-3850b3\notebooks'
   self = <numpy.distutils.tests.test_system_info.TestSystemInfoReading object at 0x0000025800448760>

   ..\python-3.8.5.amd64\lib\site-packages\numpy\distutils\tests\test_system_info.py:284: AssertionError
   ============================== warnings summary ===============================
   distutils/tests/test_system_info.py::TestSystemInfoReading::test_overrides
   C:\WinP\bd38\bucod\WPy64-3850b3\python-3.8.5.amd64\lib\site-packages\numpy\distutils\system_info.py:829: UserWarning: Specified path C:/Program Files (x86)/IntelSWTools/compilers_and_libraries_2020/windows/mkl/lib/intel64_win is invalid.
   return self.get_paths(self.section, key)

   distutils/tests/test_system_info.py::TestSystemInfoReading::test_overrides
   C:\WinP\bd38\bucod\WPy64-3850b3\python-3.8.5.amd64\lib\site-packages\numpy\distutils\system_info.py:829: UserWarning: Specified path C:/Program Files (x86)/IntelSWTools/compilers_and_libraries_2020/windows/compiler/lib/intel64_win is invalid.
   return self.get_paths(self.section, key)

   -- Docs: https://docs.pytest.org/en/latest/warnings.html
   =========================== short test summary info ===========================
   FAILED distutils/tests/test_system_info.py::TestSystemInfoReading::test_overrides
   1 failed, 10424 passed, 446 skipped, 108 deselected, 18 xfailed, 1 xpassed, 2 warnings in 193.58s (0:03:13)
   False
2. stonebig commented on Jul 26, 2020

   

   stonebig

   on Jul 26, 2020

   ContributorAuthor

   More actions

   given comment from charris in numpy issue 16769, I think it's good to go.

   Summary:

   • numpy: the failed is a new test (see numpy issue 16769), and we do 72 more tests that were deselected before
     • numpy-1.18.5 = 0 failed, 9874 passed, 372 skipped, 180 deselected, 17 xfailed, 1 xpassed , 0 warnings in 209.94s
     • numpy.-1.19.1 = 1 failed, 10424 passed, 446 skipped, 108 deselected, 18 xfailed, 1 xpassed, 2 warnings in 193.58s
   • scipy-1.15.2: identical (just 10 more warnings, can be deprecation warnings)
     • numpy-1.18.5 = 6 failed, 25012 passed, 2458 skipped, 10989 deselected, 76 xfailed, 6 xpassed, 4 warnings in 1177.17s
     • numpy-1.19.1 = 6 failed, 25012 passed, 2458 skipped, 10989 deselected, 76 xfailed, 6 xpassed, 14 warnings in 1154.18s
3. stonebig

   added this to the 2020-03 Jupyterlab-3.0 / Pyside2-5.15 / Python-3.9b4 milestone on Jul 26, 2020
4. stonebig commented on Jul 28, 2020

   

   stonebig

   on Jul 28, 2020

   ContributorAuthor

   More actions

   switching to numpy-1.19.1
5. stonebig

   closed this as completedon Jul 28, 2020

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