GeezerVison

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1. Commits on Oct 18, 2017

   • [maven-release-plugin] prepare for next development iteration

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   • [maven-release-plugin] prepare release biojava-5.0.0-alpha13

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   • [maven-release-plugin] prepare for next development iteration

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   • [maven-release-plugin] prepare release biojava-5.0.0-alpha13

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   • [maven-release-plugin] prepare for next development iteration

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   • [maven-release-plugin] prepare release biojava-5.0.0-alpha13

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2. Commits on Sep 8, 2017

   • Making it clear that the soft memory cache is a singleton

     josemduarte

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   • Fix for new tests so that they don't pollute other tests

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3. Commits on Jul 8, 2017

   • Last travis-CI build got cancelled. Re-push to trigger it again.

     arojnuckarin

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   • Revert to old behavior where process(int) return null on end-of-file.

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   • Attempt to fix issue #659 - Error parsing FASTA in multiple passes

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4. Commits on Jun 13, 2017

   • Add @since 5.0.0 annotation into AbstractReference, GenbankReference,

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     jimty0511

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5. Commits on Jun 7, 2017

   • Added Javadoc into AbstractSequence.

     jimty0511

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   • 1. Added Javadoc into AbstractReference.

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     jimty0511

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   • 1. Added a new folder into main/java/org/biojava/nbio/core/sequence package

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6. Commits on Jun 2, 2017

   • Added List<String> of comments with getter and setter into AbstractSequence.java;

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   • Merge pull request #666 from psoares/master

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     josemduarte

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7. Commits on May 31, 2017

   • Removed unused import.

     psoares

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   • Fix for #663 and some code cleanup.

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   • Merge pull request #660 from heuermh/read-rna-sequences

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     josemduarte

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8. Commits on Apr 27, 2017

   • Add methods for reading RNA sequences.

     heuermh

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9. Commits on Apr 26, 2017

   • Changing all line ending to unix (to match .gitattributes)

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   • Merge remote-tracking branch 'main/master'

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   • Comprehensive extension list in .gitattributes

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10. Commits on Apr 13, 2017

    • Exposing alignment mappings to be able to map query sequence to target sequence

      valasatava

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11. Commits on Apr 4, 2017

    • Refactoring FileDownload util to be a part of biojava-core project

      valasatava

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12. Commits on Apr 3, 2017

    • Adding a method to check whether an array of sequences contains at least two sequences of an equal length

      valasatava

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13. Commits on Mar 30, 2017

    • [maven-release-plugin] prepare for next development iteration

      josemduarte

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    • [maven-release-plugin] prepare release biojava-5.0.0-alpha8

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    • [maven-release-plugin] prepare for next development iteration

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    • [maven-release-plugin] prepare release biojava-5.0.0-alpha8

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14. Commits on Mar 29, 2017

    • [maven-release-plugin] prepare for next development iteration

      josemduarte

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    • [maven-release-plugin] prepare release biojava-5.0.0-alpha8

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15. Commits on Mar 28, 2017

    • hashCode() added for all the classes where added an equals()

      valasatava

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    • Merge branch 'sequenceEquals' of https://github.com/valasatava/biojava into sequenceEquals

      valasatava

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