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vole-core vole-core Public

core rendering canvas and data loading services for Vol-E volume viewer

TypeScript 108 11
agave agave Public

High quality visualization for volumetric image data

C++ 64 10
cyto-dl cyto-dl Public

Python 35 11
aics-ml-segmentation aics-ml-segmentation Public

Python 33 11
aics-segmentation aics-segmentation Public

Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow

Jupyter Notebook 27 17
aics-shparam aics-shparam Public

Python 24 7

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Showing 10 of 52 repositories

vole-app Public

AllenCell/vole-app's past year of commit activity

TypeScript 14 BSD-3-Clause 8 86 (7 issues need help) 11 Updated Nov 12, 2026
SubCellSeg Public
One 3D segmentation model for many fluorescently tagged cellular structures

AllenCell/SubCellSeg's past year of commit activity

Python 3 BSD-3-Clause 1 0 0 Updated Nov 11, 2026
MegaSeg Public
A repo to keep track of the ongoing efforts in MegaSeg

AllenCell/MegaSeg's past year of commit activity

Python 0 0 3 0 Updated Nov 11, 2026
vole-core Public
core rendering canvas and data loading services for Vol-E volume viewer

AllenCell/vole-core's past year of commit activity

TypeScript 108 BSD-3-Clause 11 50 16 Updated Nov 11, 2026
endothelial-pipeline Public
Dynamics of ML-based morphological features indicate a shear stress-dependent bifurcation of hiPSC-derived endothelial cell states

AllenCell/endothelial-pipeline's past year of commit activity

Python 2 BSD-3-Clause 0 5 9 Updated Nov 11, 2026
timelapse-colorizer Public
A web-based, time-series visualizer for tracked segmented data.

AllenCell/timelapse-colorizer's past year of commit activity

TypeScript 17 4 156 6 Updated Nov 9, 2026
agave Public
High quality visualization for volumetric image data

AllenCell/agave's past year of commit activity

C++ 64 10 68 36 Updated Nov 8, 2026
cell-feature-explorer Public
Plot and explore data that is linked to images, with an embedded viewer

AllenCell/cell-feature-explorer's past year of commit activity

TypeScript 2 2 67 (8 issues need help) 3 Updated Nov 3, 2026
idea-board Public

AllenCell/idea-board's past year of commit activity

TypeScript 0 2 16 4 Updated Oct 21, 2026
cell-catalog Public
Cell catalog 2.0

AllenCell/cell-catalog's past year of commit activity

TypeScript 0 MIT 0 11 5 Updated Sep 23, 2026

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