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GeezerVison is showing github.com — Machine Learning and Systems Biology Research Department

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  1. TOGL TOGL Public

    Topological Graph Neural Networks (ICLR 2022)

    Python 127 28

  2. SAT SAT Public

    Official Pytorch code for Structure-Aware Transformer.

    Python 268 40

Repositories

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Showing 10 of 124 repositories
  • ICUPrivacyAudit Public

    Code repository accompanying the manuscript "Privacy auditing with measured detection floors for generative models of ICU trajectories" submitted to RECOMB 2027.

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    BorgwardtLab/ICUPrivacyAudit's past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Nov 4, 2026
  • cosmo-experiments Public

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    BorgwardtLab/cosmo-experiments's past year of commit activity
    Python 0 0 0 0 Updated Nov 2, 2026
  • Cosmo Public

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    BorgwardtLab/Cosmo's past year of commit activity
    Python 0 0 0 0 Updated Nov 2, 2026
  • bioverse Public

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    BorgwardtLab/bioverse's past year of commit activity
    Python 2 BSD-3-Clause 0 0 0 Updated Nov 2, 2026
  • bioverse-experiments Public

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    BorgwardtLab/bioverse-experiments's past year of commit activity
    Python 0 0 0 0 Updated Nov 2, 2026
  • ChannelMixer Public

    Public repository for the channel-agnostic ChannelMixer tokenizer

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    BorgwardtLab/ChannelMixer's past year of commit activity
    0 Apache-2.0 0 0 0 Updated Nov 2, 2026
  • DeepEST Public

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    BorgwardtLab/DeepEST's past year of commit activity
    Python 10 4 0 0 Updated Sep 7, 2026
  • Gelato Public

    Code and Data for the paper: "Gelato: Graph Edit Distance via Autoregressive Neural Combinatorial Optimization" (ICLR 2026)

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    BorgwardtLab/Gelato's past year of commit activity
    Python 5 MIT 1 0 0 Updated Jun 8, 2026
  • rnaglib-experiments Public

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    BorgwardtLab/rnaglib-experiments's past year of commit activity
    Python 4 0 0 0 Updated Jun 5, 2026
  • TEDBench Public

    Protein Fold Classification at Scale: Benchmarking and Pretraining (ICML 2026 oral)

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    BorgwardtLab/TEDBench's past year of commit activity
    Python 21 BSD-3-Clause 0 0 0 Updated May 24, 2026
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