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  1. Protologger Protologger Public

    Forked from thh32/Protologger

    Protologgger is a tool for the description of novel taxa by providing taxonomic, functional and ecological insights

    Python

  2. maldipickr maldipickr Public

    Dereplicate And Cherry-pick Mass Spectrometry Spectra

    R 3 1

  3. Benchmarking-shallow-Metagenomics Benchmarking-shallow-Metagenomics Public

    Forked from NicoleTreichel/Benchmarking-shallow-Metagenomics

    Shell 5 1

  4. MiMiC2 MiMiC2 Public

    Forked from thh32/MiMiC2

    A workflow for the creation of synthetic communities that are functionally representative of an ecosystem.

    Python

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Showing 10 of 17 repositories
  • Benchmarking-shallow-Metagenomics Public Forked from NicoleTreichel/Benchmarking-shallow-Metagenomics

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    ClavelLab/Benchmarking-shallow-Metagenomics's past year of commit activity
    Shell 5 MIT 2 0 0 Updated Jul 13, 2026
  • maldipickr_manuscript Public

    Worfklow for the data analysis in the maldipickr manuscript

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    ClavelLab/maldipickr_manuscript's past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Jun 30, 2026
  • maldipickr Public

    Dereplicate And Cherry-pick Mass Spectrometry Spectra

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    ClavelLab/maldipickr's past year of commit activity
    R 3 GPL-3.0 1 5 (1 issue needs help) 0 Updated Jun 23, 2026
  • pocpbenchmark_manuscript Public

    Code and manuscript for benchmarking proteins alignment tools for improved genus delineation using the Percentage Of Conserved Proteins (POCP)

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    ClavelLab/pocpbenchmark_manuscript's past year of commit activity
    TeX 0 GPL-3.0 0 0 0 Updated Nov 15, 2025
  • pocpbenchmark Public

    Nextflow workflow for benchmarking proteins alignment tools for improved genus delineation using the Percentage Of Conserved Proteins (POCP)

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    ClavelLab/pocpbenchmark's past year of commit activity
    Nextflow 0 MIT 0 0 0 Updated Nov 15, 2025
  • hibc Public

    Shiny application to display data and metadata for The Human Intestinal Bacterial Collection (HiBC)

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    ClavelLab/hibc's past year of commit activity
    R 0 0 0 0 Updated Sep 1, 2025
  • github-repo-stats Public

    Statistics aggregation for Github repositories for NFDI4Microbiota KPI

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    ClavelLab/github-repo-stats's past year of commit activity
    0 1 0 0 Updated Apr 28, 2025
  • Protologger Public Forked from thh32/Protologger

    Protologgger is a tool for the description of novel taxa by providing taxonomic, functional and ecological insights

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    ClavelLab/Protologger's past year of commit activity
    Python 0 3 0 0 Updated Mar 31, 2025
  • MiMiC2 Public Forked from thh32/MiMiC2

    A workflow for the creation of synthetic communities that are functionally representative of an ecosystem.

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    ClavelLab/MiMiC2's past year of commit activity
    Python 0 GPL-2.0 5 0 0 Updated Mar 18, 2025
  • genome-assembly Public

    A Snakemake workflow assembling bacterial genomes according to the standard operating procedure in the Clavel Lab

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    ClavelLab/genome-assembly's past year of commit activity
    Python 4 MIT 1 0 0 Updated Mar 4, 2025
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