GeezerVison

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1. dREG dREG Public

   Detecting Regulatory Elements using GRO-seq and PRO-seq

   R 42 20

2. rtfbs_db rtfbs_db Public

   Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.

   R 23 8

3. tfTarget tfTarget Public

   Identify transcription factor-enhancer/promoter-gene network from run-on sequencing data

   R 9 3

4. proseq2.0 proseq2.0 Public

   Preprocesses and Aligns Run-On Sequencing (PRO/GRO/ChRO-seq) data from Single-Read or Paired-End Illumina Sequencing

   Shell 31 17

5. Rgtsvm Rgtsvm Public

   The R package for SVM with GPU architecture based on the GTSVM software

   C++ 32 11

6. BayesPrism BayesPrism Public

   A Fully Bayesian Inference of Tumor Microenvironment composition and gene expression

   HTML 255 59