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An R/Bioconductor package that implements a single-sample molecular phenotyping approach
R
53
8
Spatial transcriptomics analyses and decoding in R
R
27
6
An R/Bioconductor package to identify higher-order molecular phenotypes
R
19
1
Methods for label-free mass spectrometry proteomics
R
17
1
Querying cellular states and programs by learning representations of gene sets
R
16
3
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Showing 10 of 49 repositories
DavisLaboratory/GeoMXAnalysisWorkflow's past year of commit activity
R
9
5
8
0
Updated Nov 3, 2026
standR
Public
Spatial transcriptomics analyses and decoding in R
DavisLaboratory/standR's past year of commit activity
R
27
6
2
0
Updated Nov 3, 2026
DavisLaboratory/hoodscanR's past year of commit activity
R
14
GPL-3.0
0
1
0
Updated Oct 29, 2026
smartid
Public
An R package for Scoring and Marker Selection Based on Modified TF-IDF
DavisLaboratory/smartid's past year of commit activity
R
1
1
0
0
Updated Aug 21, 2026
mastR
Public
An R package for automatically screening cell type signature in specific tissue/organ/cancer.
DavisLaboratory/mastR's past year of commit activity
R
7
1
0
0
Updated May 20, 2026
msImpute
Public
Methods for label-free mass spectrometry proteomics
DavisLaboratory/msImpute's past year of commit activity
R
17
1
1
0
Updated May 13, 2026
scDECAF
Public
Querying cellular states and programs by learning representations of gene sets
DavisLaboratory/scDECAF's past year of commit activity
R
16
3
1
0
Updated Nov 2, 2025
DavisLaboratory/scDECAF-reproducibility's past year of commit activity
Jupyter Notebook
0
0
0
0
Updated Nov 2, 2025
singscore
Public
An R/Bioconductor package that implements a single-sample molecular phenotyping approach
DavisLaboratory/singscore's past year of commit activity
DavisLaboratory/emtdata's past year of commit activity
R
2
GPL-3.0
3
1
0
Updated Nov 21, 2024
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