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GeezerVison is showing github.com — DeepRank

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  1. deeprank deeprank Public archive

    This repository has been integrated in https://github.com/DeepRank/deeprank2

    Python 147 24

  2. iScore iScore Public

    iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machines

    Python 31 10

  3. pdb2sql pdb2sql Public

    Fast and versatile biomolecular structure PDB file parser using SQL queries

    Python 24 11

  4. h5xplorer h5xplorer Public

    A customizable HDF5 browser with iPython console embbeded

    Python 6 2

  5. PSSMGen PSSMGen Public

    Generates consistent PSSM and/or PDB files for protein-protein complexes

    Python 20 5

  6. deeprank2 deeprank2 Public

    An open-source deep learning framework for data mining of protein-protein interfaces or single-residue variants.

    Python 61 15

Repositories

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Showing 10 of 19 repositories
  • deeprank2 Public

    An open-source deep learning framework for data mining of protein-protein interfaces or single-residue variants.

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    DeepRank/deeprank2's past year of commit activity
    Python 61 Apache-2.0 15 27 5 Updated Oct 17, 2026
  • 3D-Vac Public

    Personalized cancer vaccine design through 3D modelling boosted geometric learning.

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    DeepRank/3D-Vac's past year of commit activity
    Jupyter Notebook 6 Apache-2.0 0 6 0 Updated Dec 3, 2024
  • h5xplorer Public

    A customizable HDF5 browser with iPython console embbeded

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    DeepRank/h5xplorer's past year of commit activity
    Python 6 Apache-2.0 2 1 1 Updated Sep 3, 2024
  • DeepRank-GNN-esm Public

    Graph Network for protein-protein interface including language model features

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    DeepRank/DeepRank-GNN-esm's past year of commit activity
    Python 34 Apache-2.0 10 1 0 Updated Mar 26, 2024
  • Deeprank-GNN Public archive

    Graph Network for protein-protein interface

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    DeepRank/Deeprank-GNN's past year of commit activity
    Python 122 Apache-2.0 32 3 0 Updated Mar 22, 2024
  • staged-recipes Public Forked from conda-forge/staged-recipes

    A place to submit conda recipes before they become fully fledged conda-forge feedstocks

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    DeepRank/staged-recipes's past year of commit activity
    Python 0 BSD-3-Clause 6,541 0 0 Updated Mar 6, 2024
  • pdbprep Public

    preprocess PDB files for deeprankcore

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    DeepRank/pdbprep's past year of commit activity
    Python 4 Apache-2.0 1 4 1 Updated Feb 5, 2024
  • DeepRank-Mut Public archive

    Deep learning framework to predict functional effects of missense variants in human

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    DeepRank/DeepRank-Mut's past year of commit activity
    Python 1 Apache-2.0 0 4 3 Updated Jan 26, 2024
  • deeprank Public archive

    This repository has been integrated in https://github.com/DeepRank/deeprank2

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    DeepRank/deeprank's past year of commit activity
    Python 147 Apache-2.0 24 74 (1 issue needs help) 0 Updated Nov 28, 2023
  • pdb2sql Public

    Fast and versatile biomolecular structure PDB file parser using SQL queries

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    DeepRank/pdb2sql's past year of commit activity
    Python 24 Apache-2.0 11 8 0 Updated Mar 17, 2023
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