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Forked from andand/DEGEPRIME
A program for degenerate primer design for broad taxonomic-range PCR for microbial ecology studies
Perl
32
7
Common Snakemake rules and workflows mainly directed towards Metagenomic analysis.
Python
20
6
Various scripts used at the EnvGen group, directed towards metagenomic analysis.
Python
15
2
Population genomics from metagenomes
Perl
13
5
The Environmental Genomic Group also does lab work. This is how we do it.
12
6
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Showing 10 of 33 repositories
POGENOM
Public
Population genomics from metagenomes
EnvGen/POGENOM's past year of commit activity
Perl
13
BSD-2-Clause
5
9
0
Updated Nov 5, 2026
TaxToolEval
Public
Code for evaluating metabarcoding taxonomy annotation tools
EnvGen/TaxToolEval's past year of commit activity
0
0
0
0
Updated Aug 12, 2026
EnvGen/envgen.github.io's past year of commit activity
HTML
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2
0
0
Updated Jun 29, 2026
EnvGen/EnvPredict's past year of commit activity
R
1
0
0
0
Updated Apr 23, 2026
phyloBOTL
Public
Phylogeny-based Ortholog-trait Linkage pipeline
EnvGen/phyloBOTL's past year of commit activity
Python
0
0
0
0
Updated Feb 10, 2026
EnvGen/Degprimer_specificity's past year of commit activity
Python
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1
0
0
Updated Dec 10, 2025
EnvGen/Degprimer_design's past year of commit activity
Python
0
1
0
0
Updated Mar 21, 2025
EnvGen/mix_assembly_pipeline's past year of commit activity
Python
2
0
0
0
Updated Apr 5, 2024
EnvGen/Gene_Catalog_Rshiny's past year of commit activity
HTML
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2
0
0
Updated Mar 28, 2024
EnvGen/B1-Ocean's past year of commit activity
Python
0
MIT
0
0
1
Updated Mar 4, 2024
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