GeezerVison

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1. bigstream bigstream Public

   Tools for distributed alignment of massive images

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2. BigStitcher BigStitcher Public

   ImgLib2/BDV implementation of Stitching for large datasets

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3. RS-FISH RS-FISH Public

   Tool for precise, interactive, fast and scalable FISH spot detection

   Java 55 15

4. multifish multifish Public

   EASI-FISH analysis pipeline for spatial transcriptomics

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5. JRCLUST JRCLUST Public

   JRCLUST

   MATLAB 35 23

6. multiview-reconstruction multiview-reconstruction Public

   Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data

   Java 35 26