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1. rnaseq rnaseq Public

   Forked from nf-core/rnaseq

   RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control

   Nextflow

2. Sarek Sarek Public

   Forked from nf-core/sarek

   Detect germline or somatic variants from normal or tumour/normal whole-genome sequencing data

   Nextflow

3. test-datasets test-datasets Public

   Forked from nf-core/test-datasets

   Test data to be used for automated testing with the nf-core pipelines

4. utils utils Public

   A repository containing helpful code snippets and stuff

   Python

5. nextflow nextflow Public

   Forked from nextflow-io/nextflow

   A DSL for data-driven computational pipelines

   Groovy

6. configs configs Public

   Forked from nf-core/configs

   Config files used to define parameters specific to compute environments at different Institutions.

   Nextflow