GV

GeezerVison

The World Wide Web, restored to 800 pixels of glory.

Home|About|Gaming cabinet|Archives|How it works|Starter sites

On this site

  • Sign in
  • MDAnalysis
  • ActionsCI/CD and automation
  • CodespacesCloud development environments
  • All Features
  • Documentation
  • Training
  • Certifications
  • Build with Copilot
  • Customize Copilot
  • Integrations
  • Trending repos
  • GitHub Sponsors
  • Developer articles

This view

  • Original page
  • New address

GeezerVison is showing github.com — MDAnalysis

README.md

MDAnalysis

The MDAnalysis Community is interested in all facets of working with data in the computational molecular sciences. We welcome everyone. We all follow our Code of Conduct.

We maintain a number of projects related to the broader goal of processing and analyzing data in the computational molecular sciences. In particular, mdanalysis is a Python library for the analysis of computer simulations of many-body systems at the molecular scale, spanning use cases from interactions of drugs with proteins to novel materials. It is widely used in the scientific community and is written by scientists for scientists.

You can learn more about MDAnalysis on our home page https://www.mdanalysis.org/ and read regular updates in our blog. You can also follow us on LinkedIn: MDAnalysis and BlueSky @mdanalysis.bsky.social.

MDAnalysis is a fiscally sponsored project of NumFOCUS, a nonprofit dedicated to supporting the open source scientific computing community.

Pinned Loading

  1. mdanalysis mdanalysis Public

    MDAnalysis is a Python library to analyze molecular dynamics simulations.

    Python 1.7k 884

  2. mdacli mdacli Public

    Command line interface for MDAnalysis

    Python 24 10

  3. MDAnalysisData MDAnalysisData Public

    Access to data for workshops and extended tests of MDAnalysis.

    Python 19 5

  4. GridDataFormats GridDataFormats Public

    GridDataFormats is a pure Python library to handle data on a regular grid using commonly used file formats in molecular simulations.

    Python 32 24

  5. UserGuide UserGuide Public

    User Guide for MDAnalysis

    Python 34 52

  6. distopia distopia Public

    SIMD instructions for faster distance calculations.

    C++ 26 8

Repositories

Loading
Type
Language
Sort
Showing 10 of 77 repositories
  • MDAnalysis.github.io Public

    MDAnalysis home page mdanalysis.org as GitHub pages.

    Uh oh!

    There was an error while loading. Please reload this page.

    MDAnalysis/MDAnalysis.github.io's past year of commit activity
    CSS 14 51 20 (2 issues need help) 1 Updated Nov 12, 2026
  • distopia Public

    SIMD instructions for faster distance calculations.

    Uh oh!

    There was an error while loading. Please reload this page.

    MDAnalysis/distopia's past year of commit activity
    C++ 26 MIT 8 12 7 Updated Nov 12, 2026
  • MDAKits Public

    The MDAnalysis Toolkits Registry

    Uh oh!

    There was an error while loading. Please reload this page.

    MDAnalysis/MDAKits's past year of commit activity
    Python 19 38 50 6 Updated Nov 11, 2026
  • membrane-curvature Public

    MDAnalysis tool to calculate membrane curvature.

    Uh oh!

    There was an error while loading. Please reload this page.

    MDAnalysis/membrane-curvature's past year of commit activity
    Python 37 GPL-3.0 11 7 3 Updated Nov 11, 2026
  • .github Public

    MDAnalysis Org profile

    Uh oh!

    There was an error while loading. Please reload this page.

    MDAnalysis/.github's past year of commit activity
    1 0 0 1 Updated Nov 9, 2026
  • GridDataFormats Public

    GridDataFormats is a pure Python library to handle data on a regular grid using commonly used file formats in molecular simulations.

    Uh oh!

    There was an error while loading. Please reload this page.

    MDAnalysis/GridDataFormats's past year of commit activity
    Python 32 LGPL-3.0 24 7 1 Updated Nov 9, 2026
  • benchmarks Public

    Performance benchmarks of MDAnalysis provided by ASV.

    Uh oh!

    There was an error while loading. Please reload this page.

    MDAnalysis/benchmarks's past year of commit activity
    Shell 3 BSD-3-Clause 4 1 0 Updated Nov 9, 2026
  • mdanalysis Public

    MDAnalysis is a Python library to analyze molecular dynamics simulations.

    Uh oh!

    There was an error while loading. Please reload this page.

    MDAnalysis/mdanalysis's past year of commit activity
    Python 1,685 884 454 (29 issues need help) 102 Updated Nov 8, 2026
  • mdakit-cookie Public

    Uh oh!

    There was an error while loading. Please reload this page.

    MDAnalysis/mdakit-cookie's past year of commit activity
    0 0 0 0 Updated Nov 8, 2026
  • mdadash Public

    Dashboard for monitoring running MD simulations using streaming (GSoC 2026).

    Uh oh!

    There was an error while loading. Please reload this page.

    MDAnalysis/mdadash's past year of commit activity
    Python 9 MIT 2 1 0 Updated Nov 7, 2026
View all repositories

People

@orbeckst @zyxue @dotsdl @bieniekmateusz @melomcr @joaomcteixeira @kain88-de @katrinr @zemanj @ianmkenney @tylerjereddy @utkbansal @alejob @richardjgowers @palnabarun @RMeli @mnmelo @IAlibay @fenilsuchak @hmacdope
View all

Top languages

Loading…

Uh oh!

There was an error while loading. Please reload this page.

Most used topics

Loading…

Uh oh!

There was an error while loading. Please reload this page.

You are visitor 01402503 — GeezerVison does not store the pages you look up.
Best viewed with Netscape Navigator 4.7 or Internet Explorer 6 at 800×600. No cookies required.