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scLVM is a modelling framework for single-cell RNA-seq data that can be used to dissect the observed heterogeneity into different sources, thereby allowing for the correction of confounding sources…
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A Gaussian process toolbox in python
Python
42
9
Bicycle: Intervention-Based Causal Discovery with Cycles
Jupyter Notebook
39
7
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Showing 10 of 63 repositories
PMBio/deeprvat's past year of commit activity
Python
53
10
4
2
Updated Nov 12, 2026
PMBio/cellina's past year of commit activity
Python
8
BSD-3-Clause
0
0
0
Updated Nov 6, 2026
PMBio/torchPP's past year of commit activity
Python
1
MIT
0
0
0
Updated Nov 5, 2026
PMBio/cellina-reproducibility's past year of commit activity
Jupyter Notebook
1
BSD-3-Clause
0
0
0
Updated Oct 30, 2026
scptseq
Public
A toolkit for processing and analyzing scPT-seq data.
PMBio/scptseq's past year of commit activity
Python
1
MIT
0
0
0
Updated Oct 26, 2026
LIVI
Public
LIVI is an interpretable deep learning framework that enables trans-eQTL mapping at single-cell resolution.
PMBio/LIVI's past year of commit activity
Python
12
BSD-3-Clause
1
0
0
Updated Oct 7, 2026
Health-Privacy-Challenge
Public
Code and documentation for the CAMDA Health Privacy Challenge and reproduction of the accompanying paper.
PMBio/Health-Privacy-Challenge's past year of commit activity
Python
9
BSD-3-Clause
8
0
1
Updated Oct 2, 2026
PMBio/interp-extrap-perturb's past year of commit activity
Jinja
10
MIT
2
0
0
Updated Sep 7, 2026
GBM_analysis
Public
Notebooks and scripts used to analyse GBM multi-ome atlas
PMBio/GBM_analysis's past year of commit activity
Jupyter Notebook
5
MIT
2
0
0
Updated Aug 14, 2026
PMBio/segger's past year of commit activity
Python
1
12
0
0
Updated Jul 5, 2026
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