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1. MentalChat16K MentalChat16K Public

   A benchmark dataset designed to support the development and evaluation of large language models (LLMs) for conversational mental health assistance

   27 4

2. FREEFORM FREEFORM Public

   FREEFORM | Knowledge-Driven Feature Selection and Engineering with Large Language Models

   Jupyter Notebook 14 1

3. QOT QOT Public

   Efficient Mining of Mass Cytometry Data through Optimal Transport

   Jupyter Notebook 6 3

4. AD-SIMLR AD-SIMLR Public

   Forked from BatzoglouLabSU/SIMLR

   Clustering Alzheimer’s Disease Subtypes via Similarity Learning and Graph Diffusion. Building on top of and forked from the implementation of the SIMLR method: https://www.nature.com/articles/nmeth…

   MATLAB 5 3

5. GROTIA GROTIA Public

   An optimal transport–based multi-omics integration framework with interpretable embeddings and clustering of integrated results

   Jupyter Notebook 3 2

6. AlzSDOH_EHRlit_KGllm AlzSDOH_EHRlit_KGllm Public

   A novel computational analysis integrating social determinants information from EHR and literature with Alzheimer’s disease biological knowledge through large language model and knowledge graphs

   Jupyter Notebook 3 1

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