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Name		Name	Last commit message	Last commit date
README.md		README.md
combineGenes_Nexus.py		combineGenes_Nexus.py
combineGenes_fastaToNexus.py		combineGenes_fastaToNexus.py
combineSubsampleTrees.py		combineSubsampleTrees.py
compareBipartitionFrequencies.py		compareBipartitionFrequencies.py
compareBipartitionFrequencies4RunsRev.py		compareBipartitionFrequencies4RunsRev.py
concatenateFasta.py		concatenateFasta.py
drawAlignment.r		drawAlignment.r
drawRandomAlignment.r		drawRandomAlignment.r
fastaToNex.py		fastaToNex.py
helpful-one-liners.md		helpful-one-liners.md
job_gnupar_mpi.pbs		job_gnupar_mpi.pbs
job_runGNU_cov.pbs		job_runGNU_cov.pbs
job_runGNU_cov_silverback.sh		job_runGNU_cov_silverback.sh
makeFileList_numTips.sh		makeFileList_numTips.sh
nexTrees_numTips.txt		nexTrees_numTips.txt
patristicDistMatrix.py		patristicDistMatrix.py
pythonTask_cov_numTips.sh		pythonTask_cov_numTips.sh
treeToConstraints.py		treeToConstraints.py
treeToConstraints2.py		treeToConstraints2.py