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ProteoBench ProteoBench Public

ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to allow a continuous, easy, and controlled comparison of prot…

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Educational_resources Educational_resources Public

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ProteoRunners ProteoRunners Public

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Results_quant_ion_DDA Results_quant_ion_DDA Public

Results_Module2_quant_DDA

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proteobench.github.io proteobench.github.io Public

Static website for ProteoBench using Quarto.
Results_quant_peptidoform_DDA Results_quant_peptidoform_DDA Public

Results_quant_peptidoform_DDA

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ProteoBench Public
ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to allow a continuous, easy, and controlled comparison of proteomics data analysis workflows. https://proteobench.cubimed.rub.de/

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Proteobench/ProteoBench's past year of commit activity

Python 60 Apache-2.0 27 47 (1 issue needs help) 12 Updated Nov 9, 2026
Results_quant_ion_DIA_ZenoTOF Public

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0 Apache-2.0 1 0 0 Updated Nov 4, 2026
ProteoRunners Public

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Python 1 0 0 0 Updated Oct 27, 2026
Results_quant_ion_DIA_diaPASEF Public

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Python 0 1 0 0 Updated Sep 28, 2026
Results_entrapment_ion_DIA_Astral Public

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0 1 0 0 Updated Sep 16, 2026
Educational_resources Public

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Jupyter Notebook 1 0 0 0 Updated Sep 4, 2026
Results_quant_ion_DIA_timsTOF_lowinput Public

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0 1 0 0 Updated Aug 13, 2026
Results_quant_ion_DIA_Astral_lowinput Public

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0 1 0 0 Updated Aug 13, 2026
Results_denovo_lfq_DDA_HCD Public

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0 1 0 0 Updated Aug 10, 2026
Results_quant_ion_DIA_Astral Public

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Python 0 1 0 0 Updated Aug 5, 2026

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