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Generate custom Docker and Singularity images, and minimize existing containers
Python
362
99
A setup for automatic generation of shareable, version-controlled BIDS datasets from MR scanners
Shell
56
15
Containers "distribution" for reproducible neuroimaging
Python
32
18
BrainVerse is an electronic laboratory notebook built as an open-source, cross-platform desktop application to help researchers manage, track and share information in a comprehensive format.
JavaScript
30
11
ReproMan (AKA NICEMAN, AKA ReproNim TRD3)
Python
24
14
A standardized form generation and data collection schema to harmonize results by design across projects.
Python
18
25
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Showing 10 of 119 repositories
mriqc-nidm_bidsapp
Public
A BIDS App that runs MRIQC quality control on neuroimaging data and converts the outputs to NIDM (Neuroimaging Data Model) format for improved interoperability and integration with existing analysis provenance graphs.
ReproNim/mriqc-nidm_bidsapp's past year of commit activity
Python
0
MIT
2
7
1
Updated Nov 12, 2026
ants-nidm_bidsapp
Public
A BIDS App for ANTs-based brain segmentation with NIDM outputs.
ReproNim/ants-nidm_bidsapp's past year of commit activity
Python
0
MIT
1
1
1
Updated Nov 12, 2026
ReproNim/simple2_bidsapp_babs's past year of commit activity
Shell
1
MIT
2
5
3
Updated Nov 12, 2026
containers
Public
Containers "distribution" for reproducible neuroimaging
ReproNim/containers's past year of commit activity
Python
32
Apache-2.0
18
43
6
Updated Nov 12, 2026
freesurfer-nidm_bidsapp
Public
A BIDS App implementation for FreeSurfer that provides standardized surface reconstruction and morphometric analysis with NIDM output.
ReproNim/freesurfer-nidm_bidsapp's past year of commit activity
Python
0
MIT
4
6
2
Updated Nov 12, 2026
ReproNim/ABCD-ReproSchema's past year of commit activity
R
0
MIT
0
0
0
Updated Nov 11, 2026
reprostim
Public
Automated capture of audio-visual stimuli into BIDS datasets
ReproNim/reprostim's past year of commit activity
Python
8
4
55
2
Updated Nov 11, 2026
repronim.org
Public
website for repronim.org: A Center for Reproducible Neuroimaging Computation
ReproNim/repronim.org's past year of commit activity
HTML
0
MIT
10
33
3
Updated Nov 9, 2026
ReproNim/hbcd-loris2reproschema's past year of commit activity
Python
0
MIT
1
0
67
Updated Nov 9, 2026
segstats_jsonld
Public
Script to Export Freesurfer-based Parcellation/Segmentation Stats and Provenance as JSON-LD and NIDM
ReproNim/segstats_jsonld's past year of commit activity
Python
1
MIT
9
11
2
Updated Nov 6, 2026