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genologics genologics Public

Forked from pekrau/genologics

Python interface to the GenoLogics LIMS server via its REST API.

Python 30 43
NouGAT NouGAT Public

Forked from vezzi/NouGAT

NouGAT is a pipeline that automates de novo assembly project tasks, generating a first draft assembly.

Python 7 7
TIDDIT TIDDIT Public

TIDDIT - structural variant calling

Cython 81 18
courses courses Public

Forked from henrythemes/jekyll-bootstrap-theme

Course homepages for some of the courses given at SciLifeLab

HTML 21 35
architecture architecture Public

Technical architecture governance for SciLifeLab infrastructure - ensuring interoperability, standards, and sustainable design

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peer_observation_of_teaching_group Public
Page for the group of teachers that want to do peer observation

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SciLifeLab/peer_observation_of_teaching_group's past year of commit activity

Shell 0 GPL-3.0 0 0 0 Updated Oct 21, 2026
teaching_literature_club Public
The SciLifeLab Teaching Literature Club

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SciLifeLab/teaching_literature_club's past year of commit activity

Shell 1 GPL-3.0 1 1 0 Updated Oct 16, 2026
isb_datasets Public
Manually curated datasest from SciLifeLab Integrated Structural Biology platform (part of IDS project)

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SciLifeLab/isb_datasets's past year of commit activity

HTML 0 0 0 0 Updated Sep 21, 2026
TIDDIT Public
TIDDIT - structural variant calling

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SciLifeLab/TIDDIT's past year of commit activity

Cython 81 18 6 1 Updated Jul 20, 2026
umi-transfer Public
A Rust software to extract Unique Molecular Identifiers in FastQ files and embedd them into the ID of the corresponding reads.

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SciLifeLab/umi-transfer's past year of commit activity

Rust 6 MIT 2 1 1 Updated May 29, 2026
architecture Public
Technical architecture governance for SciLifeLab infrastructure - ensuring interoperability, standards, and sustainable design

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SciLifeLab/architecture's past year of commit activity

Shell 0 CC-BY-SA-4.0 0 3 2 Updated May 20, 2026
genologics Public Forked from pekrau/genologics
Python interface to the GenoLogics LIMS server via its REST API.

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SciLifeLab/genologics's past year of commit activity

Python 30 MIT 53 9 0 Updated Aug 13, 2025
facs Public
Fast and Accurate Classification of Sequences using Bloom filters

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SciLifeLab/facs's past year of commit activity

Jupyter Notebook 16 9 8 0 Updated Apr 19, 2023
OrderPortal Public Forked from ScilifelabDataCentre/OrderPortal
A portal for orders (a.k.a. requests, project applications) to a SciLifeLab facility from its users.

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SciLifeLab/OrderPortal's past year of commit activity

Python 1 MIT 14 0 0 Updated Oct 18, 2022
standalone_scripts-1 Public archive Forked from NationalGenomicsInfrastructure/standalone_scripts
Repository to store standalone scripts that do not belong to any bigger package or repository

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SciLifeLab/standalone_scripts-1's past year of commit activity

Python 1 MIT 23 0 0 Updated Jun 20, 2022