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1. modules modules Public

   Forked from nf-core/modules

   Repository to host tool-specific module files for the Nextflow DSL2 community!

   Nextflow

2. test-datasets test-datasets Public

   Forked from nf-core/test-datasets

   Test data to be used for automated testing with the nf-core pipelines

3. rnadeseq rnadeseq Public

   Forked from qbic-pipelines/rnadeseq

   Differential gene expression analysis and pathway analysis of RNAseq data

   Nextflow

4. mhcquant mhcquant Public

   Forked from nf-core/mhcquant

   Identify and quantify MHC eluted peptides from mass spectrometry raw data

   Nextflow

5. sarek sarek Public

   Forked from nf-core/sarek

   Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

   Nextflow

6. bamtofastq bamtofastq Public

   Forked from nf-core/bamtofastq

   Nextflow