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GeezerVison is showing github.com — Antigenic Cartography

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  1. slurm-pipeline slurm-pipeline Public

    A Python class for scheduling SLURM jobs

    Python 62 11

  2. Racmacs Racmacs Public

    Racmacs R package for performing antigenic cartography

    JavaScript 25 11

  3. beast2-xml beast2-xml Public

    Python code to generate BEAST2 XML files

    Python 22 5

  4. dark-matter dark-matter Public

    Virus discovery

    Python 18 8

  5. figtree-recolor figtree-recolor Public

    A script to re-color a FigTree saved Nexus file

    Python 13 6

  6. ncbi-taxonomy-database ncbi-taxonomy-database Public

    How to make a mysql or sqlite database of NCBI taxonomy data for use with the dark-matter lineage fetcher

    Shell 7 2

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Showing 10 of 111 repositories
  • dark-matter Public

    Virus discovery

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    acorg/dark-matter's past year of commit activity
    Python 18 MIT 8 38 2 Updated Nov 8, 2026
  • PyLandscapes Public

    A python based library for fitting antibody landscapes to titer data

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    acorg/PyLandscapes's past year of commit activity
    Python 0 AGPL-3.0 0 0 0 Updated Sep 29, 2026
  • roessler_netzl_etal2026 Public

    Repository containing data and code for the manuscript by Rössler, Netzl, et al. 2026

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    acorg/roessler_netzl_etal2026's past year of commit activity
    HTML 0 GPL-3.0 0 0 0 Updated Sep 15, 2026
  • midtools Public

    Multiple Infection Detection - Python for detecting multiple infections from sequence reads and trying to pick them apart

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    acorg/midtools's past year of commit activity
    Python 1 1 3 6 Updated Sep 1, 2026
  • predicting_influenza_using_convergence_ms_public Public

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    acorg/predicting_influenza_using_convergence_ms_public's past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Aug 10, 2026
  • Racmacs Public

    Racmacs R package for performing antigenic cartography

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    acorg/Racmacs's past year of commit activity
    JavaScript 25 AGPL-3.0 11 36 1 Updated Jul 8, 2026
  • bermejo_netzl_et_al2025 Public

    This repository contains the code and data for the manuscript by Bermejo, M., Netzl, A., et al. 2025

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    acorg/bermejo_netzl_et_al2025's past year of commit activity
    HTML 0 GPL-3.0 0 0 0 Updated Jul 3, 2026
  • pact Public

    Python Antigenic Cartograpy Tools (PACT)

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    acorg/pact's past year of commit activity
    Python 0 AGPL-3.0 0 0 1 Updated Jun 22, 2026
  • lispmds Public

    LispMDS

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    acorg/lispmds's past year of commit activity
    Common Lisp 1 GPL-2.0 2 7 1 Updated Jun 12, 2026
  • NIAID_CEIRR_antigenic_cartography_workshop2025 Public

    This repository contains all code for the NIAID CEIRR Training Program Antigenic Cartography Workshop July 9-10, 2025

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    acorg/NIAID_CEIRR_antigenic_cartography_workshop2025's past year of commit activity
    HTML 2 GPL-3.0 4 0 0 Updated May 28, 2026
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