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GeezerVison is showing github.com — Alm Laboratory

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  1. angst angst Public

    Analyzer of Gene and Species Trees

    Python 11 6

  2. SmileTrain SmileTrain Public archive

    a 16s pipeline

    Python 6 6

  3. BIO-ML BIO-ML Public

    Command lines for the BIO-ML resources

    6 6

  4. GMbC_HGTs GMbC_HGTs Public

    Scripts and data resources from the HGT analysis of GMbC isolate genomes

    6 1

  5. adaptml adaptml Public

    Automatically partition a phylogeny according to genetic and ecological data

    Python 4 3

  6. info info Public

    Lab info, useful resources, and other common goods

    Jupyter Notebook 2 4

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Showing 10 of 17 repositories
  • SmileTrain Public archive

    a 16s pipeline

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    almlab/SmileTrain's past year of commit activity
    Python 6 MIT 6 0 0 Updated Nov 3, 2026
  • PeanutAllergy_Microbiome Public

    The repo contains scripts for reproducing microbiome data analyses of ClinicalTrial ID #NCT02960074

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    almlab/PeanutAllergy_Microbiome's past year of commit activity
    R 0 0 0 0 Updated May 28, 2026
  • www Public

    website

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    almlab/www's past year of commit activity
    Python 0 4 0 0 Updated Feb 9, 2023
  • GMbC_HGTs Public

    Scripts and data resources from the HGT analysis of GMbC isolate genomes

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    almlab/GMbC_HGTs's past year of commit activity
    6 1 0 0 Updated Jan 23, 2021
  • dbotu3 Public archive Forked from swo/dbotu3

    Distribution-based OTU calling

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    almlab/dbotu3's past year of commit activity
    Python 1 4 0 0 Updated Oct 10, 2019
  • BIO-ML Public

    Command lines for the BIO-ML resources

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    almlab/BIO-ML's past year of commit activity
    6 6 0 0 Updated Jul 13, 2019
  • info Public

    Lab info, useful resources, and other common goods

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    almlab/info's past year of commit activity
    Jupyter Notebook 2 4 0 0 Updated Nov 19, 2018
  • analysis-salt-responsive Public archive

    Analysis of 16S sequencing data for paper "Salt-responsive gut commensal modulates TH17 axis and disease"

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    almlab/analysis-salt-responsive's past year of commit activity
    Python 0 2 0 0 Updated Sep 8, 2017
  • cmit_Pipeline_MG Public

    Pipeline to process metagenomic sequencing data.

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    almlab/cmit_Pipeline_MG's past year of commit activity
    Python 0 3 0 0 Updated Aug 26, 2017
  • angst Public

    Analyzer of Gene and Species Trees

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    almlab/angst's past year of commit activity
    Python 11 6 3 0 Updated Aug 8, 2016
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