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1. bactopia bactopia Public

   A flexible pipeline for complete analysis of bacterial genomes

   Nextflow 527 83

2. bactopia-py bactopia-py Public

   A Python package for working with Bactopia

   Python 12 3

3. bactopia.github.io bactopia.github.io Public

   Bactopia Documentation

   MDX 4 12

4. bactopia-tests bactopia-tests Public

   Contains data used by Bactopia for testing.

   Standard ML 4 2

5. bactopia-assembler bactopia-assembler Public

   The assembly process used by Bactopia.

   Shell 3

6. nf-bactopia nf-bactopia Public

   A Nextflow plugin for Bactopia

   Groovy 3 1