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GeezerVison is showing github.com — Bigginlab

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  1. ABFE_workflow ABFE_workflow Public

    This is a SnakeMake based workflow for ABFE calculations that can be easily scaled in a high-throughput manner via Slurm for example.

    Python 66 20

  2. OxCompBio OxCompBio Public

    Materials for the oxford computational biochemistry course including python

    Jupyter Notebook 57 19

  3. WaterDock-2.0 WaterDock-2.0 Public

    WaterDock-2.0 implementation with Akshay Sridhar

    Python 22 9

  4. WaterDock_pymol WaterDock_pymol Public

    pymol implementation of WaterDock with Akshay Sridhar (@akshay-sridhar) and refactoring work by Patrick McCubbin (@mccubbinp)

    Python 11 7

  5. aescore aescore Public

    Forked from RMeli/aescore

    Learning Protein-Ligand Properties with Atomic Environment Vectors

    Python 10 8

  6. Macroconf Macroconf Public

    Forked from D-Cru/Macroconf

    MacroConf Dataset & Workflows to Assess Cyclic Peptide Solution Structures

    Jupyter Notebook 7 1

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Showing 10 of 28 repositories
  • spyrmsd Public Forked from RMeli/spyrmsd

    📐 Symmetry-corrected RMSD in Python

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    bigginlab/spyrmsd's past year of commit activity
    Python 3 MIT 12 0 0 Updated Apr 21, 2026
  • ABFE_workflow Public

    This is a SnakeMake based workflow for ABFE calculations that can be easily scaled in a high-throughput manner via Slurm for example.

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    bigginlab/ABFE_workflow's past year of commit activity
    Python 66 GPL-3.0 20 11 0 Updated Dec 17, 2025
  • AEV-PLIG-refined Public Forked from weitse-hsu/AEV-PLIG-refined

    A refined version of the AEV-PLIG scoring function

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    bigginlab/AEV-PLIG-refined's past year of commit activity
    Python 0 2 0 0 Updated Dec 3, 2025
  • AEV-PLIG-data Public Forked from weitse-hsu/AEV-PLIG-data

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    bigginlab/AEV-PLIG-data's past year of commit activity
    0 1 0 0 Updated Dec 3, 2025
  • bee_alpha5 Public Forked from francoviscarra/bee_alpha5

    Simulation data for "Characterization of a novel nicotinic acetylcholine receptor subtype preferentially sensitive to biogenic amines"

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    bigginlab/bee_alpha5's past year of commit activity
    Shell 0 2 0 0 Updated Nov 5, 2025
  • SLCO2A1_analysis Public Forked from weitse-hsu/SLCO2A1_analysis

    fork of Wei-Tse's SLCO2A1 analysis code

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    bigginlab/SLCO2A1_analysis's past year of commit activity
    Jupyter Notebook 0 2 0 0 Updated Oct 13, 2025
  • PoreAnalyser Public Forked from DSeiferth/PoreAnalyser

    PoreAnalyser is package written by @DSeiferth that expands HOLE results to consider asymmetry and estimate conductance

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    bigginlab/PoreAnalyser's past year of commit activity
    Python 1 LGPL-2.1 2 0 0 Updated Feb 7, 2025
  • AEV-PLIG Public Forked from oxpig/AEV-PLIG

    Fork of the AEV-PLIG Repo

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    bigginlab/AEV-PLIG's past year of commit activity
    Python 3 20 0 0 Updated Dec 10, 2024
  • PyCEC Public Forked from roncv/PyCEC

    PyCEC

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    bigginlab/PyCEC's past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Oct 2, 2024
  • NoiseEstimator Public Forked from D-Cru/NoiseEstimator

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    bigginlab/NoiseEstimator's past year of commit activity
    Jupyter Notebook 2 MIT 1 0 0 Updated May 30, 2024
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