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GeezerVison is showing github.com — GitHub - biocompute-objects/bco_api: The master repository for the JSON API.

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.github
.github
 
 
admin_only
admin_only
 
 
authentication
authentication
 
 
biocompute
biocompute
 
 
config
config
 
 
docs
docs
 
 
prefix
prefix
 
 
search
search
 
 
tests
tests
 
 
.gitgaurdian
.gitgaurdian
 
 
.gitignore
.gitignore
 
 
.secrets.example
.secrets.example
 
 
Dockerfile
Dockerfile
 
 
LICENSE
LICENSE
 
 
README.md
README.md
 
 
docker-compose.yml
docker-compose.yml
 
 
entrypoint.sh
entrypoint.sh
 
 
manage.py
manage.py
 
 
requirements.txt
requirements.txt
 
 

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BCO DB

The BioCompute Database is designed to be deployable in a variety of environments. If configured properly it should work with the BioCompute Portal reguardelss of the deployment.

The BCO API repository contains a top-level folder “admin_only” which contains service definitions for gunicorn and django, an example database, and a prepopultated .secrets file (called local_deployment.secrets).

The service definitions are for deployment on a server exposed to the internet. A local deployment will not need to use those files. Below are links to instructions for deployment in different environments.

BCODB Deployment

  • Local deployment
    • For develpment or internal use only
  • Production deployment
    • For deployment that is exposed to the internet
  • Docker deployment
    • WIP: comming soon

BCODB Development and troubleshooting

  • FAQ and trouble shooting
  • .secretes configuration
  • Testing

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The master repository for the JSON API.

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apijson

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