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Baytars

opened on Jan 24, 2021

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I have discovered some code that may be using ProtParam service (package org.biojava.nbio.aaproperties?). Any tutorial for using the package to achieve similar functionality to ProtParam, say, get amino acids percents?

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1. josemduarte commented on Jan 25, 2021

   

   josemduarte

   on Jan 25, 2021

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   Package biojava-aa-prop contains code to calculate aminoacid/peptide properties. Unfortunately it is not currently covered in the tutorial, but there is a small demo in the demo package within the module, plus a few tests in src/test (e.g. PeptidePropertiesImplTest) that should make it not too difficult to get started.
2. Baytars commented on Jan 26, 2021

   

   Baytars

   on Jan 26, 2021

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   Package biojava-aa-prop contains code to calculate aminoacid/peptide properties. Unfortunately it is not currently covered in the tutorial, but there is a small demo in the demopackage within the module, plus a few tests insrc/test(e.g.PeptidePropertiesImplTest`) that should make it not too difficult to get started.

   Thanks for your guidance! I'll check it out!

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