GV

GeezerVison

The World Wide Web, restored to 800 pixels of glory.

Home|About|Gaming cabinet|Archives|How it works|Starter sites

On this site

  • Sign in
  • blekhmanlab
  • ActionsCI/CD and automation
  • CodespacesCloud development environments
  • All Features
  • Documentation
  • Training
  • Certifications
  • Build with Copilot
  • Customize Copilot
  • Integrations
  • Trending repos
  • GitHub Sponsors
  • Developer articles

This view

  • Original page
  • New address

GeezerVison is showing github.com — Blekhman Lab

Popular repositories Loading

  1. rxivist rxivist Public archive

    API providing access to papers and authors scraped from biorxiv.org

    Python 56 10

  2. host_gene_microbiome_interactions host_gene_microbiome_interactions Public

    Analysis framework for integrating gut microbiome and host gene expression data

    R 36 16

  3. biomehorizon biomehorizon Public

    Plot microbiome time series in parallel

    R 27 5

  4. MicroBioMap MicroBioMap Public

    R package for fetching and parsing data of the Human Microbiome Compendium

    R 17 3

  5. hominid hominid Public

    Hominid: host-microbiome interaction identification

    Python 16 4

  6. rxivist_web rxivist_web Public archive

    Web application for Rxivist, the site that makes it easier to find the most talked-about papers on bioRxiv.org

    Smarty 10 4

Repositories

Loading
Type
Language
Sort
Showing 10 of 19 repositories
  • compendium_website Public

    Website for the Human Microbiome Compendium

    Uh oh!

    There was an error while loading. Please reload this page.

    blekhmanlab/compendium_website's past year of commit activity
    TypeScript 2 1 3 0 Updated Nov 5, 2026
  • MicroBioMap Public

    R package for fetching and parsing data of the Human Microbiome Compendium

    Uh oh!

    There was an error while loading. Please reload this page.

    blekhmanlab/MicroBioMap's past year of commit activity
    R 17 3 19 1 Updated May 6, 2026
  • compendium_docs Public

    ReadTheDocs source for the Human Microbiome Compendium web documentation

    Uh oh!

    There was an error while loading. Please reload this page.

    blekhmanlab/compendium_docs's past year of commit activity
    Python 0 0 0 0 Updated Mar 25, 2026
  • snakemake-compendium Public

    Human Microbiome Compendium processing pipeline

    Uh oh!

    There was an error while loading. Please reload this page.

    blekhmanlab/snakemake-compendium's past year of commit activity
    R 0 0 7 0 Updated Feb 18, 2026
  • milk_infant_microbiome Public

    Project on breast milk and infant gut microbiome

    Uh oh!

    There was an error while loading. Please reload this page.

    blekhmanlab/milk_infant_microbiome's past year of commit activity
    0 GPL-3.0 1 0 0 Updated Feb 3, 2026
  • compendium Public

    Metadata ingest service

    Uh oh!

    There was an error while loading. Please reload this page.

    blekhmanlab/compendium's past year of commit activity
    Python 9 Apache-2.0 0 13 0 Updated Dec 2, 2025
  • docker_dada2 Public

    Docker convenience image containing R and the DADA2 package (plus dependencies), used for processing amplicon data.

    Uh oh!

    There was an error while loading. Please reload this page.

    blekhmanlab/docker_dada2's past year of commit activity
    Dockerfile 0 2 2 0 Updated Feb 12, 2025
  • compendium_v1 Public

    Code associated with the first publication describing the Human Microbiome Compendium

    Uh oh!

    There was an error while loading. Please reload this page.

    blekhmanlab/compendium_v1's past year of commit activity
    R 0 0 0 0 Updated Sep 9, 2024
  • hominid Public

    Hominid: host-microbiome interaction identification

    Uh oh!

    There was an error while loading. Please reload this page.

    blekhmanlab/hominid's past year of commit activity
    Python 16 MIT 4 3 1 Updated Jun 17, 2024
  • snakemake-template Public template

    Quickstart for building out a new snakemake pipeline

    Uh oh!

    There was an error while loading. Please reload this page.

    blekhmanlab/snakemake-template's past year of commit activity
    Python 0 0 1 0 Updated Nov 16, 2023
View all repositories

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages

Loading…

Uh oh!

There was an error while loading. Please reload this page.

Most used topics

Loading…

Uh oh!

There was an error while loading. Please reload this page.

You are visitor 01402503 — GeezerVison does not store the pages you look up.
Best viewed with Netscape Navigator 4.7 or Internet Explorer 6 at 800×600. No cookies required.