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GeezerVison is showing github.com — conchoecia - Overview

@conchoecia conchoecia Follow
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@conchoecia
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darrin t schultz conchoecia

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Assistant Professor at Lehigh University. Formerly Stanford, Univ. of Vienna, UC Santa Cruz, Fulbright. Comparative Genomics. Marine Invertebrates.
106 followers · 29 following
  • Lehigh University
  • Bethlehem, Pennsylvania
  • 07:25 (UTC -05:00)
  • www.evogeno.me
  • @dts.bsky.social
  • in/darrintschultz

Achievements

Achievement: YOLOAchievement: Pair Extraordinairex2Achievement: Pull Sharkx3Achievement: QuickdrawAchievement: Starstruckx2Achievement: Arctic Code Vault Contributor

Achievements

Achievement: YOLOAchievement: Pair Extraordinairex2Achievement: Pull Sharkx3Achievement: QuickdrawAchievement: Starstruckx2Achievement: Arctic Code Vault Contributor

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conchoecia/README.md

Darrin T. Schultz — deep-sea sponge and ctenophore

Scientist and naturalist. I explore the world to understand the origin of animals and unique life on Earth. Read more about me on my personal website and lab website.

Now Hiring!

Currently seeking motivated PhD students and postdocs to join my lab (July 2026-) at Lehigh University and Lehigh Oceans. If you are interested in evolutionary genomics, chromosome biology, or molecular technology development, please reach out! [Apply for postdoc position]

Science

I bridge chromosome-scale genomics, evolutionary biology, and molecular technology development.

Selected work:

  • Tracing chromosomal changes to detangle early events in animal history and understand the deep branch points in the animal tree. Nature 2023
  • Characterizing how animal chromosomes changed over their 1-billion year history. Science Advances 2026
  • Uncovering the unique chromosome biology of the Pacific sea gooseberry comb jellyfish. G3 2021

Featured Repositories

  • odp — Oxford dot plots for comparing chromosome-scale genomes and synteny relationships. Published in Nature 2023.
  • pauvre — QC and plotting for long-read sequencing. Published in Bioinformatics 2018
  • genome_assembly_pipelines — poorly documented but very useful scripts for assembling genomes.

Links

  • Lab Website
  • Personal Website
  • Publications (Google Scholar)
  • ORCID
  • LinkedIn

Contact

Email: dts [at] lehigh [dot] edu

Pinned Loading

  1. odp odp Public

    oxford dot plots

    Python 178 13

  2. pauvre pauvre Public

    Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.

    C 55 13

  3. genome_assembly_pipelines genome_assembly_pipelines Public

    A collection of snakemake scripts to streamline genome annotation

    Python 14 1

  4. chep chep Public

    Calculate Heterozygosity with Pileup

    Python 7

  5. hdb hdb Public

    Het De Bruijn graph - for finding heterozygous genome regions in k-mer space.

    C++ 1

  6. brizzy brizzy Public

    A program to easily take spectra with Ocean Optics spectrometers. It's a breeze to use.

    Python 5 2

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