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1. bioconda/bioconda-utils bioconda/bioconda-utils Public

   Utilities for building and managing bioconda recipes

   Python 108 139

2. pybedtools pybedtools Public

   Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome arithmetic")

   Python 331 110

3. gffutils gffutils Public

   GFF and GTF file manipulation and interconversion

   Python 321 83

4. trackhub trackhub Public

   create, manage, and upload track hubs for use in the UCSC genome browser

   Python 56 20

5. lcdb/lcdb-wf lcdb/lcdb-wf Public

   Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis

   Python 24 17

6. dotfiles dotfiles Public

   dotfiles, batteries included

   Shell 22 13