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microsatellite instability detection using tumor only or paired tumor-normal data
C++
133
55
Characterization of Germline variants
Python
102
37
identifying mutational significance in cancer genomes
Perl
61
20
3D hotspot mutation proximity analysis tool
Perl
54
26
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Showing 10 of 153 repositories
misplice
Public
Discover Mutation Induced Splice Sites
ding-lab/misplice's past year of commit activity
Perl
10
GPL-3.0
5
0
0
Updated Nov 12, 2026
ding-lab/SenNet_liver's past year of commit activity
HTML
0
0
0
0
Updated Nov 2, 2026
FSAudit
Public
Filesystem audit visualization
ding-lab/FSAudit's past year of commit activity
Shell
1
0
0
0
Updated Oct 28, 2026
pancancerXenium_script
Public
Code and analysis scripts for the publication: Tumor interactions with immune and neural architectures shape invasive programs across 10 cancer types
ding-lab/pancancerXenium_script's past year of commit activity
Python
1
0
0
0
Updated Oct 26, 2026
UCHL1_publication
Public
Code and analysis scripts for the publication: [Functional and spatial multimodal dissection reveals a UCHL1-driven malignant program in clear cell renal cell carcinoma]
ding-lab/UCHL1_publication's past year of commit activity
R
1
GPL-3.0
0
0
0
Updated Oct 24, 2026
HEID
Public
Cell types and tissue structures from H&E across cancers: molecular definition of tumor boundaries, TLS and nerve regions, paired-image alignment, and the H&E models trained on them
ding-lab/HEID's past year of commit activity
Python
0
Apache-2.0
0
0
0
Updated Sep 28, 2026
10Xmapping
Public
mapping somatic variants to cell barcodes in scRNA-Seq data
ding-lab/10Xmapping's past year of commit activity
Perl
11
MIT
2
1
0
Updated Sep 21, 2026
somaticwrapper
Public
Detect somatic variants from tumor and normal WGS/WXS data
ding-lab/somaticwrapper's past year of commit activity
Perl
21
AGPL-3.0
9
1
0
Updated Sep 21, 2026
rcwrapper
Public
calculate vaf for variants based on bam
ding-lab/rcwrapper's past year of commit activity
Perl
0
0
0
0
Updated Aug 27, 2026
ding-lab/mCRC_publication's past year of commit activity
R
1
0
0
0
Updated Aug 22, 2026