GeezerVison is showing github.com — fiberseq
This is an organization for tools used in processing Fiber-seq data. Please see the book for documentation on processing Fiber-seq data.
Pinned
Loading
Tools for fiberseq data written in rust.
Rust
74
10
A Snakemake workflow for calling Fiber-seq Inferred Regulatory Elements (FIREs) on single molecules.
Python
32
9
QC plots and statistics
Shell
12
2
Source for "The computational guide to Fiber-seq"
Python
7
3
HMM-based footprint caller for single molecule footprinting data
Python
12
3
Genome browser and analysis workbench for single-molecule chromatin footprinting (Fiber-seq, DAF-seq)
TypeScript
4
Repositories
Loading
Type
All
Public
Sources
Forks
Archived
Mirrors
Templates
Language
All
Handlebars
Jupyter Notebook
Python
Rust
Shell
TypeScript
Sort
Showing 10 of 13 repositories
fiberseq/bonFIRE's past year of commit activity
Python
8
MIT
0
2
0
Updated Nov 13, 2026
FiberBrowser
Public
Genome browser and analysis workbench for single-molecule chromatin footprinting (Fiber-seq, DAF-seq)
fiberseq/FiberBrowser's past year of commit activity
TypeScript
4
MIT
0
0
0
Updated Nov 11, 2026
FiberHMM
Public
HMM-based footprint caller for single molecule footprinting data
fiberseq/FiberHMM's past year of commit activity
Python
12
MIT
3
2
1
Updated Nov 11, 2026
fiberseq/fibertools-rs's past year of commit activity
Rust
74
10
9
3
Updated Nov 5, 2026
fiberseq/fiberseq.github.io's past year of commit activity
Python
7
3
0
0
Updated Nov 2, 2026
fiberseq/The-Guide-for-DAF-seq's past year of commit activity
Handlebars
3
3
0
0
Updated Nov 2, 2026
FIRE
Public
A Snakemake workflow for calling Fiber-seq Inferred Regulatory Elements (FIREs) on single molecules.
fiberseq/FIRE's past year of commit activity
Python
32
MIT
9
11
0
Updated Oct 29, 2026
fiberseq/UCSC-Fiber-seq-hub's past year of commit activity
Python
2
0
1
0
Updated Sep 4, 2026
fiberseq/fiberseq-qc's past year of commit activity
Shell
12
GPL-3.0
2
0
0
Updated Aug 19, 2026
fiberseq/Molecular-annotation-spec's past year of commit activity
Python
6
MIT
1
2
0
Updated Aug 3, 2026
Uh oh!
There was an error while loading. Please reload this page.
Most used topics
Loading…
Uh oh!
There was an error while loading. Please reload this page.