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README.md

Welcome to the Fred Hutch Cancer Center Office of the CDO's open source software resource, getwilds (get Workflows Integrating Large Data and Software). We hope you like it here.

See our emerging website at getwilds.org and stay tuned for more as we get this effort off the ground!

Find out more about the Office of the Chief Data Officer (OCDO) at ocdo.fredhutch.org

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wilds-wdl-library wilds-wdl-library Public

Collection of bioinformatics-related WDL modules and pipelines

WDL 28 11
sixtyfour sixtyfour Public

🚚 AWS for Data Scientists

R 23 2
wilds-docker-library wilds-docker-library Public

Collection of Docker images for use in WILDS bioinformatics workflows

Dockerfile 9 3
cancerprof cancerprof Public

API Client for State Cancer Profiles

R 3 2

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getwilds.github.io Public
WILDS Website

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getwilds/getwilds.github.io's past year of commit activity

Lua 0 CC0-1.0 0 4 0 Updated Nov 11, 2026
wilds-wdl-library Public
Collection of bioinformatics-related WDL modules and pipelines

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getwilds/wilds-wdl-library's past year of commit activity

WDL 28 MIT 11 22 (5 issues need help) 4 Updated Nov 11, 2026
registry Public
WILDS Repo Registry

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getwilds/registry's past year of commit activity

Python 0 0 1 0 Updated Nov 11, 2026
wilds-docker-library Public
Collection of Docker images for use in WILDS bioinformatics workflows

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getwilds/wilds-docker-library's past year of commit activity

Dockerfile 9 MIT 3 4 2 Updated Nov 6, 2026
sixtyfour Public
🚚 AWS for Data Scientists

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getwilds/sixtyfour's past year of commit activity

R 23 2 29 2 Updated Aug 27, 2026
wilds-wdl-writer Public
An LLM-based tool for building custom WDL workflows using validated components from the WILDS WDL Library

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getwilds/wilds-wdl-writer's past year of commit activity

Python 1 MIT 0 2 0 Updated Aug 20, 2026
cbioformatter Public
cBioPortal Study Formatting Python Package

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getwilds/cbioformatter's past year of commit activity

Python 1 MIT 0 12 0 Updated Jun 22, 2026
cancerprof Public
API Client for State Cancer Profiles

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getwilds/cancerprof's past year of commit activity

R 3 2 17 0 Updated May 20, 2026
.github Public

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getwilds/.github's past year of commit activity

0 0 1 0 Updated Mar 10, 2026
ww-vc-trio Public archive
Variant calling WDL workflow using a trio of variant callers and analyzing consensus among them

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getwilds/ww-vc-trio's past year of commit activity

WDL 0 MIT 2 0 0 Updated Jan 12, 2026

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