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1. AllenInstitute/BarWare-pipeline AllenInstitute/BarWare-pipeline Public

   Hashed scRNA-seq data processing pipeline

   Shell 2 1

2. aifimmunology/aifi-healthy-pbmc-reference aifimmunology/aifi-healthy-pbmc-reference Public

   Assembly and Annotation of the Human Immune Health Atlas

   Jupyter Notebook 30 1

3. aifimmunology/repro-vrd-tea-seq aifimmunology/repro-vrd-tea-seq Public

   Reproducible analysis of T cell VRd treatment TEA-seq

   Jupyter Notebook 1

4. aifimmunology/certpro-workflow-demos aifimmunology/certpro-workflow-demos Public

   Demonstration notebooks for HISE Certificate of Reproducibility workflows

   Jupyter Notebook

5. aifimmunology/sound-life-scrna-analysis aifimmunology/sound-life-scrna-analysis Public

   Annotation and Analysis of 13M cells from the Sound Life Cohort

   Jupyter Notebook 4

6. AllenInstitute/aifi-swanson-teaseq AllenInstitute/aifi-swanson-teaseq Public

   Code related to Swanson, et. al. for TEA-seq, ICICLE-seq, and scATAC-seq data processing, analysis, and visualization

   R 13 3