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GeezerVison is showing github.com — jnooree - Overview

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@jnooree
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Nuri Jung jnooree

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Ph.D. in Chemistry. Now building better software for computational chemistry.
28 followers · 18 following
  • @Galux-Inc
  • Seoul, Korea
  • 22:17 (UTC +09:00)
  • blog.jnoor.ee
  • https://orcid.org/0000-0002-4596-1257
  • in/jnooree

Achievements

Achievement: Galaxy Brainx3Achievement: Pair Extraordinairex3Achievement: Pull Sharkx3Achievement: QuickdrawAchievement: YOLO

Achievements

Achievement: Galaxy Brainx3Achievement: Pair Extraordinairex3Achievement: Pull Sharkx3Achievement: QuickdrawAchievement: YOLO

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  • Developer Program Member
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@conda-forge @seoklab @iitp-ppi @seoklab-TA
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jnooree/README.md

About me

Building software and infrastructure for AI-driven protein design at Galux. Ph.D. in Chemistry (Seoul National University, 2026). Thesis: Computational Workflows and Software Systems for Structural Biology.

What I do

  • Software engineering. C++ and Python libraries; build systems and packaging (CMake, PyPI wheels, conda-forge); CI/CD; fuzzing.
  • Systems. GPU/HPC clusters on Ubuntu: provisioning with Ansible, scheduling with Slurm, health monitoring and automated remediation.
  • Scientific computing. Molecular modeling, docking, virtual screening, and deep learning, with working knowledge of chemistry and biochemistry.

Selected OSS contributions

  • Author and maintainer of nurikit, a C++/Python toolkit for chem- and bio-informatics: C++17 core with pybind11 bindings, native mmCIF support, protein and small-molecule structure alignment.
  • SciPy (L-BFGS-B bug fixes), e3nn (device/dtype support), MMseqs2 (memory-mapped I/O fix)
  • Ruff (LSP server), cpp-linter (parallelism)
  • Homebrew (multiple formulas/casks)
  • Full list: merged PRs

Tech stack

  • Python, C/C++, Bash/zsh
  • PyTorch, CMake, Ansible, Slurm, GitHub Actions

Education

  • Ph.D. in Chemistry, Seoul National University (seoklab), 2026.
  • B.S. in Chemistry and Computational Sciences, Seoul National University, 2022.

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  1. seoklab/nurikit seoklab/nurikit Public

    *The* fundamental software platform for chem- and bio-informatics

    C++ 8 6

  2. jnooree.github.io jnooree.github.io Public

    Forked from jeffreytse/jekyll-theme-yat

    Source code of my blog

    SCSS

  3. dotfiles dotfiles Public

    Shell

  4. jnooree-zsh-theme jnooree-zsh-theme Public

    Shell

  5. rcode rcode Public

    Command line of VSCode for ssh sessions

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