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1. EI-CoreBioinformatics/mikado EI-CoreBioinformatics/mikado Public

   Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to select the best models in each locus.

   Python 116 20

2. EI-CoreBioinformatics/reat EI-CoreBioinformatics/reat Public

   Robust Eukaryotic Annotation Toolkit

   Python 18 3

3. bioinfologics/sdg bioinfologics/sdg Public

   Sequence Distance Graph framework: graph + reads + mapping + analysis

   C++ 25 6

4. bioinfologics/w2rap-contigger bioinfologics/w2rap-contigger Public

   An Illumina PE genome contig assembler, can handle large (17Gbp) complex (hexaploid) genomes.

   C++ 46 14

5. jic-dtool/dservercore jic-dtool/dservercore Public

   dserver makes dtool datasets findable, hence rendering the dtool ecosystem fit for a FAIR data management world.

   Python 4 5

6. ondaCUDA ondaCUDA Public

   Finite differences wave propagation on the GPU

   C++