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GeezerVison is showing github.com โ€” muffato - Overview

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Matthieu Muffato muffato

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Informatics Infrastructure Team Lead, Tree of Life programme. Formerly Ensembl Compara, TreeFam, and eHive at EMBL-EBI.
76 followers ยท 17 following
  • Wellcome Sanger Institute
  • Cambridge, United Kingdom
  • https://muffato.github.io
  • https://orcid.org/0000-0002-7860-3560
  • in/matthieu-muffato

Achievements

Achievement: Pair Extraordinairex4Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault ContributorAchievement: StarstruckAchievement: Pull Sharkx3

Achievements

Achievement: Pair Extraordinairex4Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault ContributorAchievement: StarstruckAchievement: Pull Sharkx3

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@nf-core @sanger-tol @CobiontID @Rust-Wellcome
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muffato/README.md

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Commit stats Language stats

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  1. Ensembl/ensembl-compara Ensembl/ensembl-compara Public

    The Ensembl Compara Perl API and SQL schema

    Perl 56 68

  2. Ensembl/ensembl-hive Ensembl/ensembl-hive Public archive

    EnsEMBL Hive - a system for creating and running pipelines on a distributed compute resource

    Perl 55 29

  3. docker-ensembl-linuxbrew-compara docker-ensembl-linuxbrew-compara Public archive

    Docker image with all dependencies to run the Ensembl Compara pipelines

    Dockerfile

  4. Ensembl/ensembl-hive-docker-swarm Ensembl/ensembl-hive-docker-swarm Public archive

    'Docker Swarm' implementation of Ensembl Hive Meadow interface

    Perl 1 3

  5. pyEnsemblRest pyEnsemblRest Public archive

    Python wrapper of the Ensembl REST API

    Python 1

  6. AltHapAlignR_py AltHapAlignR_py Public archive

    Python script to combine BAM files and intersect them with a GTF file, used in jknightlab/AltHapAlignR

    Python

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