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1. biocommons/hgvs biocommons/hgvs Public

   Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature.org/).

   Python 294 105

2. biocommons/uta biocommons/uta Public

   Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; available as a docker image

   Python 73 27

3. biocommons/seqrepo biocommons/seqrepo Public

   non-redundant, compressed, journalled, file-based storage for biological sequences

   Python 52 35

4. biocommons/eutils biocommons/eutils Public archive

   simplified searching, fetching, and parsing records from NCBI using their E-utilities interface

   Python 63 29

5. biocommons/bioutils biocommons/bioutils Public

   provides common tools and lookup tables used primarily by the hgvs and uta packages

   Python 25 23

6. ga4gh/vrs ga4gh/vrs Public

   Extensible specification for representing and uniquely identifying biological sequence variation

   Jupyter Notebook 100 43