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MMseqs2: ultra fast and sensitive search and clustering suite
C
2.2k
316
Remote protein homology detection suite.
C
633
152
Predict prokaryotic host for phage metagenomic sequences
C++
57
9
Bayesian Markov Model motif discovery tool version 2 - An expectation maximization algorithm for the de novo discovery of enriched motifs as modelled by higher-order Markov models.
C++
17
5
Discovery of conserved gene clusters in multiple genomes
C
137
7
MMseqs2 app to run on your workstation or servers
Vue
126
33
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Showing 10 of 59 repositories
MMseqs2-App
Public
MMseqs2 app to run on your workstation or servers
soedinglab/MMseqs2-App's past year of commit activity
Vue
126
GPL-3.0
33
17
11
Updated Nov 12, 2026
MMseqs2
Public
MMseqs2: ultra fast and sensitive search and clustering suite
soedinglab/MMseqs2's past year of commit activity
soedinglab/phylo_grad's past year of commit activity
Rust
5
Apache-2.0
0
0
0
Updated Nov 6, 2026
soedinglab/MMseqs2-Regression's past year of commit activity
Shell
2
GPL-3.0
7
0
3
Updated Nov 2, 2026
spacedust
Public
Discovery of conserved gene clusters in multiple genomes
soedinglab/spacedust's past year of commit activity
C
137
GPL-3.0
7
18
0
Updated Oct 22, 2026
soedinglab/phylo_score's past year of commit activity
Jupyter Notebook
0
0
0
0
Updated Oct 15, 2026
hh-suite
Public
Remote protein homology detection suite.
soedinglab/hh-suite's past year of commit activity
metaeuk
Public
MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics
soedinglab/metaeuk's past year of commit activity
C
214
GPL-3.0
26
30
0
Updated Sep 22, 2026
soedinglab/metaeuk-regression's past year of commit activity
Perl
0
GPL-3.0
1
0
0
Updated Sep 8, 2026
MAGmax
Public
From dereplication to genome enrichment: Enhancing genome recovery across metagenomic samples using MAGmax
soedinglab/MAGmax's past year of commit activity
Rust
39
GPL-3.0
5
1
0
Updated Aug 28, 2026
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