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1. Pyomo/pyomo Pyomo/pyomo Public

   An object-oriented algebraic modeling language in Python for structured optimization problems.

   Python 2.6k 605

2. dowlinglab/Initiator_Cell_GNN_Development dowlinglab/Initiator_Cell_GNN_Development Public

   Code repository for managing progress and storing code related to Stephen's SAI F25 Fellowship, collaborating with Dr. Yamil Colon and Dr. Andrey Kuehlkamp.

   Jupyter Notebook

3. MSELab_Calcium_Cartography_2021 MSELab_Calcium_Cartography_2021 Public

   Forked from MulticellularSystemsLab/MSELab_Calcium_Cartography_2021

   This is a code repository for the manuscript titled: From spikes to intercellular waves: tuning intercellular Ca2+ signaling dynamics modulates organ size control.

   Jupyter Notebook 1

4. ReverseEngineeringMorphogenesis ReverseEngineeringMorphogenesis Public

   Forked from MulticellularSystemsLab/ReverseEngineeringMorphogenesis

   Storing work and file history for work using this software.

   Jupyter Notebook

5. pyomo-doe pyomo-doe Public

   Forked from dowlinglab/pyomo-doe

   Workshop tutorials for Pyomo.DoE

   Jupyter Notebook

6. ndcbe/optimization ndcbe/optimization Public

   Nonlinear and Stochastic Optimization, CBE & ACMS 60499 / 40499 at U. Notre Dame

   Jupyter Notebook 14 29