A high-performance C++ application for generating 3D point clouds from stereo camera images using GPU acceleration (CUDA for NVIDIA or HIP for AMD GPUs).

computer-vision hpc gpu-computing status-active status-finished lang-cpp ai-ml-portfolio scope-medium framework-docker framework-cuda gpu-scientific gpu-vision gpu-deep-learning gpu-rocm

• Updated May 19, 2026
• C++

The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

status-active task-alignment lang-cpp domain-bioinformatics task-file-io interface-api status-published method-statistics role-toolkit scope-swissknife entity-nucleic-acid task-sequence-analysis entity-sequence domain-genomics

• Updated Jul 20, 2026
• C++

OpenMM plugin to define forces with neural networks

status-active lang-python lang-cpp method-deep-learning role-plugin entity-protein entity-small-molecule interface-api status-published status-packaged-conda scope-focused method-physics domain-molecular-simulation entity-trajectory interface-gpu ecosystem-openmm task-md-engine task-ml-potential

• Updated Jun 24, 2026
• C++

Protein Pocket Detection with Geometry Features and Hierarchy.

status-archived lang-cpp interface-cli role-application domain-structural-biology entity-protein status-published scope-focused domain-drug-discovery task-pocket-detection method-physics

• Updated May 29, 2018
• C++

Library for reading and writing chemistry files

status-active role-library lang-python lang-cpp domain-cheminformatics task-file-io method-chemoinformatics entity-protein entity-small-molecule interface-api status-published status-packaged-pypi status-packaged-conda scope-focused domain-molecular-simulation entity-trajectory

• Updated Jun 19, 2026
• C++

Solvation Structure and Thermodynamic Mapping

status-active lang-python lang-cpp interface-cli role-application entity-protein interface-api status-published scope-focused domain-drug-discovery method-physics method-statistics domain-molecular-simulation task-trajectory-analysis entity-trajectory task-free-energy

• Updated Dec 17, 2025
• Python

ESP32-S3 feed dispenser featuring an LVGL touchscreen interface, HX711 weighing, and servo control. Supports dosing by weight or monetary value, manual dispensing, and a PC simulator.

arduino servo esp32 embedded-systems arduino-sketch servo-motor hx711 lvgl esp32-s3 lvgl-esp32 lang-cpp lang-c

• Updated Nov 2, 2026
• C

Reduce - tool for adding and correcting hydrogens in PDB files

status-active lang-cpp interface-cli role-application domain-structural-biology entity-protein status-published status-packaged-conda scope-focused method-physics entity-nucleic-acid task-structure-prep method-rule-based

• Updated Jan 5, 2026
• C++

A deep learning package for many-body potential energy representation and molecular dynamics

status-active lang-python lang-cpp method-deep-learning role-framework entity-small-molecule interface-api status-published status-packaged-pypi status-packaged-conda scope-focused method-physics domain-molecular-simulation entity-trajectory interface-gpu lang-cuda entity-crystal task-md-engine domain-computational-chemistry task-ml-potential

• Updated Jul 29, 2026
• Python

Oxford Nanopore's Basecaller

status-active lang-python lang-cpp domain-bioinformatics interface-cli method-deep-learning role-application status-published status-packaged-conda scope-focused entity-nucleic-acid task-sequence-analysis entity-sequence interface-gpu domain-genomics

• Updated Jul 22, 2026
• C++

Development version of plumed 2

status-active lang-python lang-cpp interface-cli role-plugin entity-protein entity-small-molecule interface-api status-published status-packaged-conda scope-focused method-physics method-statistics domain-molecular-simulation task-trajectory-analysis entity-trajectory task-free-energy

• Updated Jul 20, 2026
• C++

IQ-TREE software version 2: phylogenetics by maximum likelihood

status-active lang-cpp domain-bioinformatics interface-cli role-application entity-protein status-published status-packaged-conda scope-focused method-statistics entity-nucleic-acid task-sequence-analysis entity-sequence

• Updated Jul 22, 2026
• C++

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

status-active lang-python lang-cpp domain-bioinformatics interface-cli method-deep-learning role-application status-published scope-focused entity-nucleic-acid entity-sequence interface-gpu domain-genomics task-variant-analysis

• Updated Mar 19, 2026
• Python

Public development project of the LAMMPS MD software package

status-active lang-python lang-cpp interface-cli role-framework entity-small-molecule interface-api status-published status-packaged-conda scope-focused method-physics domain-molecular-simulation entity-trajectory interface-gpu lang-cuda entity-crystal task-md-engine domain-materials

• Updated Jul 28, 2026
• C++

Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas.

status-active lang-cpp task-visualization domain-cheminformatics task-file-io method-chemoinformatics entity-small-molecule status-published scope-focused interface-gui entity-crystal role-viewer domain-computational-chemistry

• Updated Jul 27, 2026
• C++

A GitHub Action that inspects Visual Studio / Visual C++ environment variables (optionally converting to Cygwin or MSYS2 paths)

visual-studio msbuild environment-variables cygwin msys2 lang-cpp lang-c

• Updated Feb 20, 2026
• TypeScript

this fork addresses the 2023 HTTPS migration issue and completely ports the project to ESP8266

iot status-active status-finished lang-cpp scope-large platforms-tools platforms-portfolio

• Updated May 19, 2026
• C++

AutoDock Vina

status-active lang-cpp interface-cli role-application domain-structural-biology entity-protein entity-small-molecule status-published status-packaged-conda scope-focused domain-drug-discovery task-docking method-physics entity-complex ecosystem-autodock

• Updated Feb 25, 2026
• C++

GPU-accelerated protein-ligand docking with automated pocket detection, exploring through multi-pocket conditioning. Official Implementation of PocketVina

status-active lang-python lang-cpp interface-cli method-deep-learning role-application domain-structural-biology entity-protein entity-small-molecule interface-api status-published scope-focused domain-drug-discovery task-pocket-detection task-docking method-physics entity-complex interface-gpu

• Updated Nov 22, 2025
• C++

Python interface of cpptraj

status-active role-library lang-python lang-cpp task-file-io entity-protein interface-api status-published status-packaged-conda scope-focused method-physics method-statistics domain-molecular-simulation task-trajectory-analysis entity-trajectory

• Updated Mar 6, 2026
• Jupyter Notebook