A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing digital reconstructions of neuronal morphology skeletons extracted from microscopy stacks.

visualization morphologies neurons blender-addon neural-modeling mesh-reconstruction soma-reconstruction morphology-analysis morphology-visualization media-production simulation-based-neuroscience blue-brain-project bbp

• Updated Oct 29, 2025
• Python

Neuronal Morphology Analysis Tool

python morphologies neurons

• Updated Feb 26, 2025
• Python

Neuronal morphology preparation and classification using Machine Learning.

morphologies classification-models

• Updated Jul 5, 2024
• Python

T2N is an extension of the TREES toolbox providing an interface between Matlab and the compartmental modeling environment NEURON. It was published in (and should be cited this way): Beining M, Mongiat, LA, Schwarzacher SW, Cuntz H, Jedlicka P: T2N as a new tool for robust electrophysiological modeling demonstrated for mature and adult-born denta…

interface analysis matlab morphologies neuron neuron-simulations matlab-toolbox biophysical compartmental-models

• Updated Sep 3, 2019
• MATLAB

Определение частей речи / Нормализация текста: приведение всех слов к словарной форме в тексте на русском языке

nlp natural-language-processing morphology linguistics morphologies lingvo nlp-machine-learning pos-tagging morphological-analysis pos-tagger part-of-speech-tagging

• Updated Oct 11, 2026
• C#

Part-of-Speech Tagging / Normalization of words in English texts

nlp natural-language-processing morphology linguistics morphologies lingvo nlp-machine-learning pos-tagging morphological-analysis pos-tagger part-of-speech-tagging

• Updated Oct 11, 2026
• C#

The NeuGen VRL-Studio Plugin

java simulation morphologies vrl-studio neuronal networks

• Updated Aug 17, 2016
• Java

Slithering snake code from summer 2005 - http://pubs.acs.org/doi/abs/10.1021/nl0608386

polymer transport kinetic-monte-carlo slithering-snakes metropolis-monte-carlo morphologies percolation-threshold polymer-chains

• Updated Dec 9, 2013
• C

Density visualization plugin for neuronal morphologies

java morphologies swc vrl-plugin density-visualization vrl-studio neuronal

• Updated Jul 29, 2021
• Java