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1. BIMSBbioinfo/janggu BIMSBbioinfo/janggu Public

   Deep learning infrastructure for genomics

   Jupyter Notebook 258 34

2. BIMSBbioinfo/scbrowse BIMSBbioinfo/scbrowse Public

   An interactive browser for single-cell ATAC-seq data

   Python 5 1

3. motifcounter motifcounter Public

   R package for identifying motif matches and motif enrichment in DNA sequences

   C 4 2

4. SpreedictorMPowerParkinson SpreedictorMPowerParkinson Public

   This project was used for participating in the MPower Subchallenge of the Parkinson's disease digital biomarker DREAM challenge

   Python 4 1

5. BIMSBbioinfo/bavaria BIMSBbioinfo/bavaria Public

   Batch-adversarial variational auto-encoder (BAVARIA) for simultaneous dimensionality reduction and integration of single-cell ATAC-seq datasets

   Jupyter Notebook 16 6

6. BIMSBbioinfo/scregseg BIMSBbioinfo/scregseg Public

   Single-cell regulatory landscape segmentation

   Jupyter Notebook 6 2