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An imagemagick-like frontend to Biopython SeqIO
Python
121
22
Create and maintain phylogenetic "reference packages" of biological sequences.
Python
22
13
Make and use nested directory trees corresponding to combinatorial choices of parameters
Python
20
1
Demonstration files and scripts for our high-throughput sequencing analysis pipeline
Shell
6
Graph clustering by flow simulation
C
6
2
A python front end for Chris Quince's AmpliconNoise c code
C
5
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Showing 10 of 12 repositories
yapp
Public
Yet another pplacer pipeline
fhcrc/yapp's past year of commit activity
Python
0
0
3
2
Updated Jul 13, 2026
taxtastic
Public
Create and maintain phylogenetic "reference packages" of biological sequences.
fhcrc/taxtastic's past year of commit activity
Python
22
GPL-3.0
13
4
0
Updated May 27, 2026
deenurp
Public
16S rRNA gene sequence curation and phylogenetic reference set creation
fhcrc/deenurp's past year of commit activity
Python
4
GPL-3.0
3
15
1
Updated Mar 19, 2026
mcl
Public
Graph clustering by flow simulation
fhcrc/mcl's past year of commit activity
C
6
2
0
0
Updated Dec 1, 2025
seqmagick
Public
An imagemagick-like frontend to Biopython SeqIO
fhcrc/seqmagick's past year of commit activity
Python
121
GPL-3.0
22
15
1
Updated Mar 18, 2024
nestly
Public
Make and use nested directory trees corresponding to combinatorial choices of parameters
fhcrc/nestly's past year of commit activity
Python
20
MIT
1
5
0
Updated Apr 23, 2017
ampliconnoise
Public
A python front end for Chris Quince's AmpliconNoise c code
fhcrc/ampliconnoise's past year of commit activity
C
5
GPL-3.0
0
1
0
Updated Jul 2, 2015
biopy
Public
Automatically exported from code.google.com/p/biopy
fhcrc/biopy's past year of commit activity
Python
1
0
0
0
Updated Mar 14, 2015
prepdrm
Public
Analysis pipeline for identifying low frequency drug resistance mutations (DRMs) in samples from the Partners PrEP study
fhcrc/prepdrm's past year of commit activity
C
0
GPL-3.0
0
0
0
Updated Jun 30, 2014
mutgen
Public
Generate mutations under a motif based mutation model
fhcrc/mutgen's past year of commit activity
Python
3
GPL-3.0
0
0
0
Updated Jun 19, 2014
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