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1. jbloomlab/SARS2-RBD-escape-calc jbloomlab/SARS2-RBD-escape-calc Public

   SARS-CoV-2 RBD antibody escape calculator

   Jupyter Notebook 13 3

2. jbloomlab/polyclonal jbloomlab/polyclonal Public

   Model mutational escape from polyclonal antibodies.

   Jupyter Notebook 3

3. jbloomlab/SARS2-mut-fitness jbloomlab/SARS2-mut-fitness Public

   Observed substitution counts of SARS-CoV-2 compared to those expected under the mutation rates

   Jupyter Notebook 22 9

4. jbloomlab/neutcurve jbloomlab/neutcurve Public

   Fit and plot neutralization curves

   Jupyter Notebook 9 5

5. jbloomlab/dms_variants jbloomlab/dms_variants Public

   Analyze deep mutational scanning of barcoded variants.

   Jupyter Notebook 8 12