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GeezerVison is showing github.com — timodonnell - Overview

@timodonnell timodonnell Follow
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Tim O'Donnell timodonnell

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83 followers · 9 following
  • Somerville MA
  • https://timodonnell.github.io
  • https://orcid.org/0000-0002-9949-069X
  • @timodonnell

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Achievement: Pair Extraordinairex3Achievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: Pull Sharkx3Achievement: Starstruck

Achievements

Achievement: Pair Extraordinairex3Achievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: Pull Sharkx3Achievement: Starstruck

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@hammerlab @Open-Athena
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  1. openvax/mhcflurry openvax/mhcflurry Public

    Peptide-MHC I binding affinity prediction

    Python 282 74

  2. yabul yabul Public

    Yet Another Bioinformatics Utilities Library

    Python 3

  3. pyopen pyopen Public

    load csv, excel, json, hdf5, and pickle files into an ipython session

    Python 4

  4. Open-Athena/helico Open-Athena/helico Public

    Convert (potentially incomplete) protein contact maps to 3D structures

    Python 8 1

  5. pyconfind pyconfind Public

    Python implementation of ConFind from Grigoryan Lab

    Python 2

  6. Open-Athena/MarinFold Open-Athena/MarinFold Public

    Protein structure via next token prediction

    Jupyter Notebook 35 2

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