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count-data

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Here are 47 public repositories matching this topic...

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All 47 R 27 Python 8 JavaScript 2 Jupyter Notebook 2 C 1 C++ 1 CSS 1 PHP 1 Shell 1 TeX 1
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PLN-team / PLNmodels

Star 61

A collection of Poisson lognormal models for multivariate count data analysis

network-inference pca r-package multivariate-analysis count-data poisson-lognormal-model
  • Updated Oct 2, 2026
  • R
OUTRIDER

gagneurlab / OUTRIDER

Star 58

OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data

rna-seq r diagnostics outlier-detection mendelian-genetics expression-analysis count-data
  • Updated Nov 10, 2026
  • R
rpact

rpact-com / rpact

Star 40

rpact: Confirmatory Adaptive Clinical Trial Design and Analysis

r analysis simulation rstats clinical-trials r-package validated count-data gxp sample-size-calculation adaptive-design power-calculation group-sequential-designs
  • Updated Nov 12, 2026
  • R

jalal246 / textics

Star 35

📉 JavaScript Text Statistics that counts lines, words, chars, and spaces.

counter statistics tools stream string curl text memo search-in-text string-calculator characters string-search wordsearch count-lines count-data linesearch textics get-info mytools counts-lines
  • Updated Aug 30, 2022
  • JavaScript

anjalisilva / MPLNClust

Star 20

R Package With Shiny App: Permit to Perform and Visualize Clustering of Count Data via Mixtures of Multivariate Poisson-log Normal Model

data-visualization model-selection data-simulation r-package mixture-model heatmaps bic posterior-probability aic model-based-clustering count-data icl shinyapp lineplot mcmc-em mpln-distribution variational-em aic3
  • Updated Aug 24, 2025
  • R

TeamMacLean / atacr

Star 14

Analysing Capture Seq Count Data

science data bioinformatics r genomics analysis capture rnaseq atac-seq count-data
  • Updated Jun 11, 2018
  • R

tqch / poisson-jump

Star 10

Official Implementation of Paper "Learning to Jump: Thinning and Thickening Latent Counts for Generative Modeling" (ICML 2023)

count-data diffusion-models generative-modeling
  • Updated Jun 6, 2023
  • Python

anjalisilva / mixMVPLN

Star 9

R Package with Shiny App: Permit to Perform Clustering of Three-way Count Data Using Mixtures of Matrix Variate Poisson-log Normal Model With Parameter Estimation via MCMC-EM, Variational Gaussian Approximations, or a Hybrid Approach Combining Both.

visualization clustering data-simulation stan matrix-variate-distributions model-based-clustering count-data modelselection mixture-models mcmc-em variational-gaussian
  • Updated Sep 18, 2024
  • R

GeoBosh / Countr

Star 4

R package for flexible univariate count models based on renewal processes

count-data sports-modelling renewal-process
  • Updated Dec 7, 2025
  • R

BioGenies / countfitteR

Star 4
cancer cancer-imaging-research count-data count-distribution foci
  • Updated Jul 1, 2025
  • CSS

ihmeuw-msca / CorrelatedCounts

Star 4

Modeling correlated count data

expectation-maximization count-data mixed-effects-models
  • Updated Jul 6, 2020
  • Python

MFaymon / spINAR

Star 4

Semiparametric and parametric estimation and bootstrapping of integer-valued autoregressive (INAR) models.

validation time-series simulation bootstrapping count-data penalization semiparametric-estimation parametric-estimation
  • Updated May 8, 2024
  • R

jalal246 / textics-stream

Star 4

Text Statistics For Node Streams

counter node statistics stream string text search-in-text transformer string-calculator string-manipulation characters string-search wordsearch count-lines count-data linesearch textics get-info mytools textics-stream
  • Updated Dec 18, 2020
  • JavaScript

blog-neas / INAr

Star 3

Generation, estimation and testing of INteger Autoregressive models

r time-series r-package count-data
  • Updated Oct 5, 2026
  • R

junsoukchoi / ZiGDAG

Star 2

R package for model-based causal discovery for zero-inflated count data

bayesian-network single-cell-rna-seq directed-acyclic-graph count-data zero-inflated causal-discovery
  • Updated Oct 3, 2022
  • R

krishan57gupta / ROSeq

Star 2

ROSeq - A rank based approach to modeling gene expression with filtered and normalized read count matrix. Takes in the complete filtered and normalized read count matrix, the location of the two sub-populations and the number of cores to be used.

tutorial gene-expression rank vignette populations normalization gene-expression-profiles tmm count-data tung tung-dataset
  • Updated Feb 16, 2021
  • R

AlexandreBSimas / mixpoissonreg

Star 2

Mixed Poisson Regression for Overdispersed Count Data

diagnostics negative-binomial-regression count-data local-influence poisson-inverse-gaussian-regression influence-analysis
  • Updated Mar 12, 2021
  • R

cakraawijaya / WB-Register

Star 2

Web Programming Class | Final Project | Campus Assignment

git search bootstrap php website composer crud validation sql js register telegram-bot webhook mariadb botman error-handling ngrok xampp count-data font-awasome
  • Updated Apr 22, 2026
  • PHP

monty-se / skellam

Star 2

R package for statistical modeling with the Skellam distribution, supporting inference, random sampling, and regression for differences of independent Poisson counts.

regression inference estimation probability-distribution maximum-likelihood-estimation statistical-modeling count-data random-sampling skellam-distribution poisson-differences
  • Updated Nov 9, 2026
  • R

ananta-mimo / gwnbr

Star 2

Geographically Weighted Negative Binomial Regression in Python - local spatial modeling for over dispersed count data.

python spatial-statistics overdispersion transportation-safety geographically-weighted-regression count-data gwr negative-binomial
  • Updated Oct 8, 2026
  • Python

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