List of Computer Science courses with video lectures.

computer-science security machine-learning bioinformatics web-development reinforcement-learning computer-vision deep-learning algorithms robotics computational-biology databases embedded-systems systems computational-physics quantum-computing computer-architecture database-systems

• Updated Nov 10, 2026

Turn any AI agent into an AI Scientist. The #1 Agent Skills library for science, used by 250,000+ scientists worldwide. 177 ready-to-use validated skills plus 100+ scientific databases covering biology, chemistry, medicine, and drug discovery. Compatible with Cursor, Claude Code, Codex, Pi, Antigravity, and the open Agent Skills standard.

bioinformatics genomics computational-biology scientific-visualization scientific-computing drug-discovery data-analysis proteomics metabolomics chemoinformatics materials-science clinical-research claude ai-scientist agent-skills claudecode claude-skills

• Updated Nov 9, 2026
• Python

Data Apps & Dashboards for Python. No JavaScript Required.

react python productivity flask finance data-science bioinformatics ai jupyter web-app plotly data-visualization dash dashboards gui-framework charting technical-computing plotly-dash

• Updated Nov 10, 2026
• Python

Official git repository for Biopython (originally converted from CVS)

python bioinformatics genomics protein-structure dna protein biopython phylogenetics sequence-alignment

• Updated Nov 11, 2026
• Python

The open-source AI workbench for scientific research

agent cli open-source science opensource bioinformatics research ai ml scientific-computing bun ml-engineering ai-agent research-tools llm ai-scientist co-scientist

• Updated Nov 12, 2026
• TypeScript

A curated list of awesome Bioinformatics libraries and software.

awesome bioinformatics awesome-list

• Updated Sep 27, 2026

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

python bioinformatics clustering gene-expression data-visualization dimensionality-reduction awesome-list data-integration atac-seq single-cell rna-seq-data scrna-seq-data cell-differentiation gene-expression-profiles analysis-pipeline spatial-transcriptomics cell-populations rna-seq-experiments cell-clusters

• Updated Nov 7, 2026

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

science machine-learning bioinformatics deep-learning genomics genome tensorflow ngs sequencing dna deep-neural-network deepvariant

• Updated Oct 26, 2026
• Python

A workflow language for data-driven computational pipelines

docker groovy hello aws cloud bioinformatics pipeline nextflow hpc reproducible-research workflow-engine slurm pipeline-framework sge singularity reproducible-science dataflow singularity-containers

• Updated Nov 12, 2026
• Groovy

Making Protein folding accessible to all!

bioinformatics protein-structure structure-prediction multiple-sequence-alignment

• Updated Nov 9, 2026
• Jupyter Notebook

Single-cell analysis in Python. Scales to >100M cells.

python data-science machine-learning bioinformatics transcriptomics visualize-data scanpy anndata scverse

• Updated Nov 12, 2026
• Python

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

adapter quality bioinformatics quality-control filter ngs sequencing overlap splitting duplication umi trimming preprocessing filtering illumina fastq merging qc polyg

• Updated Oct 7, 2026
• C++

A versatile pairwise aligner for genomic and spliced nucleotide sequences

bioinformatics genomics sequence-alignment spliced-alignment

• Updated May 19, 2026
• C

MMseqs2: ultra fast and sensitive search and clustering suite

bioinformatics taxonomy metagenomics alignment sequence-clustering profile-search sequence-search linclust mmseqs blast

• Updated Nov 11, 2026
• C

A curated list of awesome AI tools, libraries, papers, datasets, and frameworks that accelerate scientific discovery — from physics and chemistry to biology, materials, and beyond.

awesome bioinformatics awesome-list scientific-ai ai4science ai-for-science ai4s

• Updated Nov 12, 2026

Hundreds of agent skills for medical research, including protocol design, data analysis, evidence insights, and academic writing.

science bioinformatics ai genomics biology computational-biology data-visualization medical cancer-genomics data-analysis single-cell differential-expression medical-research

• Updated Sep 17, 2026
• Python

Official code repository for GATK versions 4 and up

science bioinformatics spark genomics genome ngs sequencing dna gatk

• Updated Nov 12, 2026
• Java

A full spaCy pipeline and models for scientific/biomedical documents.

nlp bioinformatics spacy biomedical custom-pipes scientific-documents

• Updated Dec 4, 2025
• Python

Data intensive science for everyone.

science workflow bioinformatics pipeline genomics workflow-engine ngs sequencing dna usegalaxy hacktoberfest

• Updated Nov 12, 2026
• Python

Conda recipes for the bioconda channel.

bioinformatics conda hacktoberfest package-management

• Updated Nov 12, 2026
• Shell