Generate an interactive dot plot from mummer or minimap alignments

plotly mummer dotplot

• Updated Jan 17, 2024
• HTML

Highly customizable, ambiguity-aware dotplots for visual sequence analyses

visualization bioinformatics biology longest-common-subsequence sequence-analysis dotplot repetitive-dna pairwise-comparisons

• Updated Apr 20, 2026
• Python

Dotplot large Genomes in an Interactive, Efficient and Simple way

bioinformatics genome inra comparision dotplot genotoul inrae

• Updated Sep 30, 2026
• JavaScript

A dotplot generator for large chromosomes

fast lightweight genomics genome plants sequence-alignment chromosomes dotplot genome-comparisons

• Updated Oct 3, 2023
• C

Generate interactive dotplot from mummer4 output using plotly

visualization bioinformatics mummer dotplot genome-alignment

• Updated Feb 29, 2020
• Python

Simple visualisation tool for sequences' similarity in bioinformatics

bioinformatics visualisation gene-similarity protein-sequence dotplot

• Updated Apr 12, 2018
• Python

A basic extension library for creating tree dot plots, strip plots or dot charts w/ matplotlib or seaborn in Python

python data-science data-visualization seaborn data-analysis dotplot matplotlib-pyplot matplotlib-python seaborn-plots dotplots dot-chart strip-plots

• Updated Feb 2, 2025
• Python

Package for automation of statistics that are widely used in metabolomics.

r statistics heatmap pca metabolomics boxplot pcoa dotplot permanova barplot shapiro-wilk volcano nmds metabolomics-pipeline

• Updated Nov 13, 2021
• R

bioinformatics needleman-wunsch dotplot slidingwindow smithwater

• Updated Nov 9, 2020
• Python

Light Weighted dotplot drawer

dotplot python-dotplot

• Updated Jul 1, 2021
• Jupyter Notebook

This repository houses data visualization with Python.

heatmap pandas data-visualization python3 seaborn data-analysis matplotlib datavisualization dotplot barplot grouped-bar-chart matplotlib-pyplot stacked-bar-chart

• Updated Sep 1, 2020
• Jupyter Notebook

Compare biological sequences by the diagonal plot method

sequence-to-sequence sequence-alignment dotplot diagonal-plot

• Updated Nov 22, 2019
• Java

Nextflow pipeline for de novo hifi genome assembly for Daphnia obtusa

nextflow denovo-assembly dotplot non-model-species daphnia

• Updated Feb 26, 2025
• Nextflow

A Python library for making fast dot-plot comparisons of DNA sequences powered by Rust

bioinformatics dotplot genome-visualization

• Updated Nov 1, 2026
• Python

Archive of my STA 271 graphs

r statistics rstudio histogram boxplot scatterplot dotplot bargraph

• Updated Jan 5, 2023
• R