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GeezerVison is showing www.rcsb.org — Annotations: 2GZK

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 2GZK | pdb_00002gzk

  • FASTA Sequence
  • mmCIF Format
  • mmCIF Format (Header)
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  • Legacy PDB Format (Header)
  • FASTA Sequence
  • PDBx/mmCIF Format
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  • Biological Assembly 1 (CIF - gz) 
  • Biological Assembly 1 (PDB - gz)
 Data API 

Structure of a complex of tandem HMG boxes and DNA

External Resource: Annotation

  • Domain Annotation: SCOP/SCOPe Classification
  • Domain Annotation: SCOP2 Classification
  • Domain Annotation: ECOD Classification
  • Domain Annotation: CATH
  • Protein Family Annotation
  • Gene Ontology: Gene Product Annotation
  • InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
C [auth A]d2gzka1 All alpha proteins HMG-box HMG-box HMG-box High mobility group protein 1, HMG1 human (Homo sapiens ) [TaxId: 9606 ], black rat (Rattus rattus ) [TaxId: 10117 ], SCOPe (2.08)
C [auth A]d2gzka2 All alpha proteins HMG-box HMG-box HMG-box SRY human (Homo sapiens ) [TaxId: 9606 ], black rat (Rattus rattus ) [TaxId: 10117 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth A]SCOP2B SuperfamilyHMG-box 8036768 3001368 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth A]PABPe2gzkA1 A: alpha arraysX: HTHH: PABC(PABP) domainT: PABC(PABP) domainF: PABPECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C [auth A]1.10.30.10 Mainly Alpha Orthogonal Bundle DNA Binding (I), subunit A High mobility group box domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth A]PF00505HMG (high mobility group) box (HMG_box)HMG (high mobility group) boxDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth A]Sex-determining region on Y / HMGB1
  • binding
  • nucleic acid binding
  • DNA binding
  • double-stranded DNA binding
  • supercoiled DNA binding
  • DNA binding, bending
  • non-sequence-specific DNA binding, bending
  • DNA secondary structure binding
  • four-way junction DNA binding
  • bubble DNA binding
  • crossed form four-way junction DNA binding
  • lipid binding
  • lipopolysaccharide binding
  • carbohydrate derivative binding
  • binding
  • nucleic acid binding
  • DNA binding
  • double-stranded DNA binding
  • supercoiled DNA binding
  • DNA binding, bending
  • non-sequence-specific DNA binding, bending
  • DNA secondary structure binding
  • four-way junction DNA binding
  • bubble DNA binding
  • crossed form four-way junction DNA binding
  • lipid binding
  • lipopolysaccharide binding
  • carbohydrate derivative binding
  • enzyme regulator activity
  • kinase activator activity
  • enzyme activator activity
  • molecular function activator activity
  • molecular function regulator activity
  • protein kinase activator activity
  • protein kinase regulator activity
  • kinase regulator activity
  • transcription corepressor activity
  • transcription regulator activity
  • transcription coregulator activity
  • transcription factor binding
  • protein binding
  • DNA-binding transcription factor binding
  • calcium-dependent protein kinase regulator activity
  • single-stranded DNA binding
  • endodeoxyribonuclease activator activity
  • nuclease activator activity
  • sequence-specific DNA binding
  • sequence-specific double-stranded DNA binding
  • transcription cis-regulatory region binding
  • transcription regulatory region nucleic acid binding
  • RNA binding
  • double-stranded RNA binding
  • glycolipid binding
  • open form four-way junction DNA binding
  • modified amino acid binding
  • ion binding
  • anion binding
  • phospholipid binding
  • phosphatidylserine binding
  • small molecule binding
  • chemokine binding
  • C-X-C chemokine binding
  • cytokine binding
  • rRNA binding
  • 5S rRNA binding
  • signaling receptor regulator activity
  • receptor ligand activity
  • signaling receptor activator activity
  • RNA polymerase II-specific DNA-binding transcription factor binding
  • protein heterodimerization activity
  • protein dimerization activity
  • transcription coactivator activity
  • lyase activity
  • catalytic activity
  • single-stranded RNA binding
  • damaged DNA binding
  • bent DNA binding
  • cell adhesion molecule binding
  • protein-containing complex binding
  • integrin binding
  • signaling receptor binding
  • cytokine activity
  • RAGE receptor binding
  • peptide binding
  • DNA polymerase binding
  • enzyme binding
  • heparin binding
  • glycosaminoglycan binding
  • sulfur compound binding
  • DNA-binding transcription factor activity, RNA polymerase II-specific
  • DNA-binding transcription factor activity
  • RNA polymerase II transcription regulatory region sequence-specific DNA binding
  • cis-regulatory region sequence-specific DNA binding
  • RNA polymerase II cis-regulatory region sequence-specific DNA binding
  • DNA-binding transcription activator activity, RNA polymerase II-specific
  • DNA-binding transcription activator activity
  • response to stimulus
  • response to chemical
  • response to xenobiotic stimulus
  • multicellular organismal process
  • regulation of cellular process
  • interleukin-1 production
  • positive regulation of biological process
  • positive regulation of macromolecule biosynthetic process
  • positive regulation of metabolic process
  • positive regulation of biosynthetic process
  • regulation of cytokine production
  • cytokine production
  • positive regulation of interleukin-1 production
  • regulation of multicellular organismal process
  • response to stimulus
  • response to chemical
  • response to xenobiotic stimulus
  • multicellular organismal process
  • regulation of cellular process
  • interleukin-1 production
  • positive regulation of biological process
  • positive regulation of macromolecule biosynthetic process
  • positive regulation of metabolic process
  • positive regulation of biosynthetic process
  • regulation of cytokine production
  • cytokine production
  • positive regulation of interleukin-1 production
  • regulation of multicellular organismal process
  • positive regulation of macromolecule metabolic process
  • positive regulation of cellular process
  • regulation of biosynthetic process
  • regulation of biological process
  • regulation of interleukin-1 production
  • biological regulation
  • regulation of macromolecule metabolic process
  • gene expression
  • macromolecule biosynthetic process
  • regulation of gene expression
  • biosynthetic process
  • positive regulation of gene expression
  • positive regulation of multicellular organismal process
  • regulation of macromolecule biosynthetic process
  • metabolic process
  • cellular process
  • macromolecule metabolic process
  • positive regulation of cytokine production
  • regulation of metabolic process
  • immune system development
  • developmental process
  • multicellular organism development
  • immune system process
  • anatomical structure development
  • regulation of immune system process
  • regulation of tolerance induction
  • animal gross anatomical part developmental process
  • tolerance induction
  • system development
  • regulation of developmental process
  • cellular developmental process
  • regulation of cell differentiation
  • positive regulation of myoblast differentiation
  • muscle structure development
  • positive regulation of developmental process
  • positive regulation of cell differentiation
  • cell differentiation
  • regulation of myoblast differentiation
  • myoblast differentiation
  • cellular response to stimulus
  • positive regulation of cell communication
  • positive regulation of response to biotic stimulus
  • regulation of toll-like receptor 9 signaling pathway
  • positive regulation of signal transduction
  • pattern recognition receptor signaling pathway
  • regulation of signal transduction
  • response to biotic stimulus
  • intracellular signal transduction
  • cell communication
  • immune response-activating signaling pathway
  • positive regulation of immune response
  • signal transduction
  • positive regulation of immune system process
  • innate immune response-activating signaling pathway
  • positive regulation of pattern recognition receptor signaling pathway
  • immune response
  • response to other organism
  • regulation of innate immune response
  • response to external stimulus
  • positive regulation of intracellular signal transduction
  • regulation of response to stimulus
  • defense response to other organism
  • regulation of pattern recognition receptor signaling pathway
  • positive regulation of defense response
  • toll-like receptor 9 signaling pathway
  • activation of innate immune response
  • regulation of immune response
  • activation of immune response
  • cytoplasmic pattern recognition receptor signaling pathway
  • regulation of defense response
  • regulation of response to biotic stimulus
  • biological process involved in interspecies interaction between organisms
  • regulation of response to external stimulus
  • intracellular receptor signaling pathway
  • signaling
  • regulation of cytoplasmic pattern recognition receptor signaling pathway
  • positive regulation of response to stimulus
  • endolysosomal toll-like receptor signaling pathway
  • positive regulation of response to external stimulus
  • immune response-regulating signaling pathway
  • regulation of intracellular signal transduction
  • regulation of response to stress
  • response to stress
  • innate immune response
  • response to external biotic stimulus
  • positive regulation of toll-like receptor 9 signaling pathway
  • regulation of signaling
  • positive regulation of innate immune response
  • defense response
  • defense response to symbiont
  • regulation of cell communication
  • positive regulation of signaling
  • myoblast proliferation
  • cell population proliferation
  • cellular component organization
  • organelle organization
  • DNA geometric change
  • chromosome organization
  • DNA conformation change
  • cellular component organization or biogenesis
  • response to antibiotic
  • behavior
  • system process
  • learning or memory
  • nervous system process
  • cognition
  • memory
  • positive regulation of locomotion
  • regulation of cell motility
  • positive regulation of smooth muscle cell migration
  • regulation of smooth muscle cell migration
  • positive regulation of cell migration
  • smooth muscle cell migration
  • muscle cell migration
  • regulation of locomotion
  • positive regulation of cell motility
  • regulation of cell migration
  • cell migration
  • cell motility
  • locomotion
  • regulation of leukocyte differentiation
  • cell development
  • mononuclear cell differentiation
  • regulation of cell development
  • positive regulation of hemopoiesis
  • regulation of multicellular organismal development
  • hemopoiesis
  • positive regulation of cell development
  • regulation of dendritic cell differentiation
  • regulation of hemopoiesis
  • dendritic cell differentiation
  • positive regulation of leukocyte differentiation
  • positive regulation of dendritic cell differentiation
  • leukocyte differentiation
  • adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains
  • lymphocyte activation
  • lymphocyte differentiation
  • cell activation involved in immune response
  • CD4-positive, alpha-beta T cell differentiation
  • leukocyte activation
  • alpha-beta T cell differentiation
  • T cell activation involved in immune response
  • alpha-beta T cell activation involved in immune response
  • T cell activation
  • CD4-positive, alpha-beta T cell activation
  • leukocyte activation involved in immune response
  • alpha-beta T cell activation
  • T cell differentiation
  • lymphocyte activation involved in immune response
  • T-helper cell differentiation
  • cell activation
  • T cell differentiation involved in immune response
  • T-helper 1 type immune response
  • adaptive immune response
  • immune effector process
  • T-helper 1 cell differentiation
  • regulation of neuron projection development
  • regulation of cellular component organization
  • positive regulation of cellular component organization
  • cell projection organization
  • neuron projection development
  • neurogenesis
  • neuron differentiation
  • positive regulation of neuron projection development
  • positive regulation of cell projection organization
  • plasma membrane bounded cell projection organization
  • regulation of cell projection organization
  • nervous system development
  • generation of neurons
  • neuron development
  • regulation of plasma membrane bounded cell projection organization
  • positive regulation of interleukin-8 production
  • interleukin-8 production
  • regulation of interleukin-8 production
  • response to type II interferon
  • response to cytokine
  • response to peptide
  • negative regulation of transcription initiation by RNA polymerase II
  • transcription preinitiation complex assembly
  • negative regulation of biological process
  • regulation of primary metabolic process
  • negative regulation of RNA biosynthetic process
  • cellular component biogenesis
  • nucleobase-containing compound metabolic process
  • DNA-templated transcription
  • regulation of DNA-templated transcription initiation
  • regulation of RNA metabolic process
  • cellular component assembly
  • transcription by RNA polymerase II
  • negative regulation of nucleobase-containing compound metabolic process
  • regulation of nucleobase-containing compound metabolic process
  • transcription initiation at RNA polymerase II promoter
  • regulation of transcription by RNA polymerase II
  • negative regulation of DNA-templated transcription
  • negative regulation of cellular component organization
  • negative regulation of transcription by RNA polymerase II
  • negative regulation of metabolic process
  • primary metabolic process
  • negative regulation of protein-containing complex assembly
  • negative regulation of macromolecule biosynthetic process
  • RNA polymerase II preinitiation complex assembly
  • regulation of DNA-templated transcription
  • negative regulation of RNA metabolic process
  • regulation of RNA polymerase II transcription preinitiation complex assembly
  • negative regulation of RNA polymerase II transcription preinitiation complex assembly
  • RNA metabolic process
  • protein-DNA complex organization
  • RNA biosynthetic process
  • nucleic acid biosynthetic process
  • regulation of protein-containing complex assembly
  • protein-containing complex assembly
  • negative regulation of cellular process
  • regulation of RNA biosynthetic process
  • negative regulation of macromolecule metabolic process
  • protein-containing complex organization
  • protein-DNA complex assembly
  • nucleobase-containing compound biosynthetic process
  • regulation of cellular component biogenesis
  • DNA-templated transcription initiation
  • nucleic acid metabolic process
  • negative regulation of biosynthetic process
  • regulation of transcription initiation by RNA polymerase II
  • negative regulation of DNA-templated transcription initiation
  • anatomical structure morphogenesis
  • cell morphogenesis
  • positive regulation of cell population proliferation
  • endothelial cell proliferation
  • positive regulation of epithelial cell proliferation
  • regulation of vascular endothelial cell proliferation
  • regulation of endothelial cell proliferation
  • regulation of cell population proliferation
  • positive regulation of endothelial cell proliferation
  • regulation of epithelial cell proliferation
  • vascular endothelial cell proliferation
  • epithelial cell proliferation
  • positive regulation of vascular endothelial cell proliferation
  • interleukin-10 production
  • regulation of interleukin-10 production
  • positive regulation of interleukin-10 production
  • regulation of type II interferon production
  • type II interferon production
  • negative regulation of type II interferon production
  • negative regulation of cytokine production
  • negative regulation of gene expression
  • negative regulation of multicellular organismal process
  • import into cell
  • localization
  • transport
  • phagocytosis
  • apoptotic cell clearance
  • endocytosis
  • establishment of localization
  • cellular response to interleukin-1
  • cellular response to cytokine stimulus
  • response to interleukin-1
  • positive regulation of autophagy
  • catabolic process
  • autophagy
  • regulation of catabolic process
  • regulation of autophagy
  • positive regulation of catabolic process
  • process utilizing autophagic mechanism
  • negative regulation of DNA replication
  • DNA metabolic process
  • DNA replication
  • negative regulation of DNA metabolic process
  • regulation of DNA metabolic process
  • regulation of DNA replication
  • interferon-alpha production
  • regulation of interferon-alpha production
  • positive regulation of type I interferon production
  • type I interferon production
  • positive regulation of interferon-alpha production
  • regulation of type I interferon production
  • chromatin organization
  • rhythmic process
  • circadian rhythm
  • immune response-regulating cell surface receptor signaling pathway
  • cell surface toll-like receptor signaling pathway
  • immune response-activating cell surface receptor signaling pathway
  • regulation of toll-like receptor 4 signaling pathway
  • positive regulation of toll-like receptor 4 signaling pathway
  • innate immune response activating cell surface receptor signaling pathway
  • cell surface pattern recognition receptor signaling pathway
  • cell surface receptor signaling pathway
  • toll-like receptor 4 signaling pathway
  • positive chemotaxis
  • chemotaxis
  • positive regulation of positive chemotaxis
  • induction of positive chemotaxis
  • regulation of chemotaxis
  • positive regulation of chemotaxis
  • regulation of positive chemotaxis
  • taxis
  • positive regulation of ERK1 and ERK2 cascade
  • intracellular signaling cassette
  • positive regulation of MAPK cascade
  • regulation of MAPK cascade
  • MAPK cascade
  • ERK1 and ERK2 cascade
  • regulation of ERK1 and ERK2 cascade
  • lymphocyte mediated immunity
  • regulation of immune effector process
  • T cell mediated immunity
  • immune response to tumor cell
  • regulation of response to tumor cell
  • T cell mediated immune response to tumor cell
  • regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains
  • regulation of T cell mediated immune response to tumor cell
  • leukocyte mediated immunity
  • regulation of T cell mediated immunity
  • response to tumor cell
  • regulation of adaptive immune response
  • regulation of immune response to tumor cell
  • regulation of leukocyte mediated immunity
  • regulation of lymphocyte mediated immunity
  • regulation of localization
  • negative regulation of transport
  • negative regulation of endocytosis
  • negative regulation of phagocytosis
  • regulation of endocytosis
  • regulation of transport
  • regulation of phagocytosis
  • negative regulation of apoptotic cell clearance
  • regulation of apoptotic cell clearance
  • regulation of myeloid cell differentiation
  • myeloid cell differentiation
  • positive regulation of myeloid cell differentiation
  • positive regulation of mesenchymal cell proliferation
  • regulation of mesenchymal cell proliferation
  • mesenchymal cell proliferation
  • regulation of interleukin-12 production
  • interleukin-12 production
  • positive regulation of interleukin-12 production
  • toll-like receptor 2 signaling pathway
  • response to hexose
  • response to monosaccharide
  • response to carbohydrate
  • response to glucose
  • response to oxygen-containing compound
  • regulation of interferon-beta production
  • interferon-beta production
  • positive regulation of interferon-beta production
  • chromatin remodeling
  • nucleosome assembly
  • nucleosome organization
  • regulation of blood vessel endothelial cell migration
  • endothelial cell migration
  • positive regulation of blood vessel endothelial cell migration
  • positive regulation of endothelial cell migration
  • blood vessel endothelial cell migration
  • regulation of endothelial cell migration
  • neuron apoptotic process
  • apoptotic process
  • cell death
  • programmed cell death
  • regulation of cellular response to stress
  • cellular response to stress
  • nucleotide-excision repair
  • DNA repair
  • regulation of DNA repair
  • DNA damage response
  • regulation of nucleotide-excision repair
  • response to hormone
  • response to endogenous stimulus
  • response to peptide hormone
  • response to insulin
  • response to nitrogen compound
  • heterochromatin formation
  • epigenetic regulation of gene expression
  • heterochromatin organization
  • negative regulation of gene expression, epigenetic
  • regulation of non-canonical NF-kappaB signal transduction
  • non-canonical NF-kappaB signal transduction
  • positive regulation of non-canonical NF-kappaB signal transduction
  • regulation of sprouting angiogenesis
  • angiogenesis
  • regulation of vasculature development
  • tube morphogenesis
  • positive regulation of sprouting angiogenesis
  • regulation of anatomical structure morphogenesis
  • blood vessel development
  • blood vessel morphogenesis
  • tube development
  • positive regulation of angiogenesis
  • sprouting angiogenesis
  • vasculature development
  • circulatory system development
  • positive regulation of vasculature development
  • regulation of angiogenesis
  • anatomical structure formation involved in morphogenesis
  • psychomotor behavior
  • motor behavior
  • myeloid dendritic cell activation
  • myeloid leukocyte activation
  • inflammatory response
  • positive regulation of cell cycle
  • mitotic cell cycle
  • regulation of mitotic cell cycle
  • positive regulation of mitotic cell cycle
  • cell cycle
  • regulation of cell cycle
  • regulation of tumor necrosis factor production
  • positive regulation of tumor necrosis factor superfamily cytokine production
  • tumor necrosis factor superfamily cytokine production
  • positive regulation of tumor necrosis factor production
  • tumor necrosis factor production
  • regulation of tumor necrosis factor superfamily cytokine production
  • response to lipid
  • response to lipopolysaccharide
  • response to bacterium
  • response to molecule of bacterial origin
  • homeostatic process
  • neutrophil clearance
  • neutrophil homeostasis
  • multicellular organismal-level homeostasis
  • leukocyte homeostasis
  • homeostasis of number of cells
  • myeloid cell homeostasis
  • toll-like receptor signaling pathway
  • MyD88-dependent toll-like receptor signaling pathway
  • positive regulation of response to wounding
  • wound healing
  • regulation of response to wounding
  • positive regulation of wound healing
  • regulation of wound healing
  • response to wounding
  • monosaccharide metabolic process
  • energy derivation by oxidation of organic compounds
  • carbohydrate catabolic process
  • regulation of generation of precursor metabolites and energy
  • regulation of polysaccharide metabolic process
  • macromolecule catabolic process
  • positive regulation of glycogen metabolic process
  • glucan metabolic process
  • polysaccharide metabolic process
  • regulation of small molecule metabolic process
  • regulation of glycogen catabolic process
  • glycogen catabolic process
  • small molecule metabolic process
  • positive regulation of glycogen catabolic process
  • regulation of carbohydrate metabolic process
  • regulation of glucose metabolic process
  • carbohydrate metabolic process
  • regulation of carbohydrate catabolic process
  • glucan catabolic process
  • glycogen metabolic process
  • hexose metabolic process
  • generation of precursor metabolites and energy
  • positive regulation of glucose metabolic process
  • polysaccharide catabolic process
  • energy reserve metabolic process
  • positive regulation of carbohydrate metabolic process
  • positive regulation of small molecule metabolic process
  • regulation of glycogen metabolic process
  • glucose metabolic process
  • positive regulation of programmed cell death
  • regulation of apoptotic process
  • regulation of programmed cell death
  • positive regulation of apoptotic process
  • myeloid cell apoptotic process
  • positive regulation of myeloid cell apoptotic process
  • regulation of myeloid cell apoptotic process
  • actin cytoskeleton organization
  • actin filament-based process
  • cytoskeleton organization
  • regulation of interleukin-1 beta production
  • positive regulation of interleukin-1 beta production
  • interleukin-1 beta production
  • chemokine (C-X-C motif) ligand 2 production
  • regulation of chemokine (C-X-C motif) ligand 2 production
  • positive regulation of chemokine (C-X-C motif) ligand 2 production
  • regulation of chemokine production
  • chemokine production
  • positive regulation of chemokine production
  • positive regulation of JNK cascade
  • JNK cascade
  • regulation of JNK cascade
  • macrophage activation involved in immune response
  • myeloid cell activation involved in immune response
  • macrophage activation
  • negative regulation of locomotion
  • negative regulation of endothelial cell migration
  • negative regulation of blood vessel endothelial cell migration
  • negative regulation of cell motility
  • negative regulation of cell migration
  • inflammatory response to antigenic stimulus
  • positive regulation of monocyte chemotaxis
  • regulation of monocyte chemotaxis
  • myeloid leukocyte migration
  • positive regulation of mononuclear cell migration
  • regulation of mononuclear cell migration
  • cell chemotaxis
  • regulation of leukocyte chemotaxis
  • regulation of leukocyte migration
  • positive regulation of leukocyte migration
  • positive regulation of leukocyte chemotaxis
  • monocyte chemotaxis
  • leukocyte migration
  • cellular response to chemical stimulus
  • mononuclear cell migration
  • leukocyte chemotaxis
  • base-excision repair
  • mismatch repair
  • positive regulation of mismatch repair
  • positive regulation of DNA repair
  • positive regulation of DNA metabolic process
  • regulation of mismatch repair
  • positive regulation of DNA-templated transcription
  • positive regulation of transcription by RNA polymerase II
  • positive regulation of RNA metabolic process
  • positive regulation of RNA biosynthetic process
  • macrophage inflammatory protein-1 alpha production
  • regulation of macrophage inflammatory protein 1 alpha production
  • positive regulation of macrophage inflammatory protein 1 alpha production
  • positive regulation of cytosolic calcium ion concentration
  • regulation of biological quality
  • endothelial cell chemotaxis
  • plasmacytoid dendritic cell activation
  • interleukin-6 production
  • positive regulation of interleukin-6 production
  • regulation of interleukin-6 production
  • regulation of toll-like receptor 2 signaling pathway
  • positive regulation of toll-like receptor 2 signaling pathway
  • animal organ development
  • respiratory tube development
  • lung development
  • respiratory system development
  • cellular response to lipopolysaccharide
  • cellular response to molecule of bacterial origin
  • cellular response to oxygen-containing compound
  • cellular response to biotic stimulus
  • cellular response to lipid
  • regulation of monocyte chemotactic protein-1 production
  • positive regulation of monocyte chemotactic protein-1 production
  • monocyte chemotactic protein-1 production
  • response to corticosteroid
  • response to steroid hormone
  • response to glucocorticoid
  • regulation of alpha-beta T cell activation
  • regulation of leukocyte activation
  • regulation of cell activation
  • negative regulation of cell adhesion
  • negative regulation of T cell differentiation
  • negative regulation of hemopoiesis
  • negative regulation of leukocyte differentiation
  • negative regulation of T cell activation
  • negative regulation of leukocyte cell-cell adhesion
  • negative regulation of CD4-positive, alpha-beta T cell activation
  • negative regulation of cell-cell adhesion
  • negative regulation of lymphocyte differentiation
  • regulation of leukocyte cell-cell adhesion
  • negative regulation of CD4-positive, alpha-beta T cell differentiation
  • negative regulation of leukocyte activation
  • regulation of CD4-positive, alpha-beta T cell differentiation
  • regulation of alpha-beta T cell differentiation
  • negative regulation of alpha-beta T cell differentiation
  • negative regulation of lymphocyte activation
  • leukocyte cell-cell adhesion
  • regulation of T cell differentiation
  • cell adhesion
  • cell-cell adhesion
  • negative regulation of cell differentiation
  • regulation of cell-cell adhesion
  • regulation of lymphocyte differentiation
  • negative regulation of developmental process
  • regulation of cell adhesion
  • regulation of T cell activation
  • negative regulation of cell activation
  • negative regulation of cell development
  • regulation of CD4-positive, alpha-beta T cell activation
  • negative regulation of immune system process
  • negative regulation of alpha-beta T cell activation
  • regulation of lymphocyte activation
  • response to alcohol
  • response to ethanol
  • positive regulation of cell activation
  • lymphocyte proliferation
  • positive regulation of leukocyte activation
  • regulation of leukocyte proliferation
  • positive regulation of T cell activation
  • positive regulation of lymphocyte proliferation
  • positive regulation of T cell proliferation
  • positive regulation of activated T cell proliferation
  • mononuclear cell proliferation
  • positive regulation of leukocyte proliferation
  • regulation of activated T cell proliferation
  • positive regulation of leukocyte cell-cell adhesion
  • leukocyte proliferation
  • activated T cell proliferation
  • positive regulation of cell-cell adhesion
  • positive regulation of lymphocyte activation
  • positive regulation of mononuclear cell proliferation
  • T cell proliferation
  • regulation of lymphocyte proliferation
  • positive regulation of cell adhesion
  • regulation of T cell proliferation
  • regulation of mononuclear cell proliferation
  • sensory organ development
  • eye development
  • visual system development
  • sensory system development
  • positive regulation of phosphorylation
  • regulation of protein modification process
  • regulation of protein phosphorylation
  • positive regulation of protein metabolic process
  • positive regulation of phosphate metabolic process
  • positive regulation of protein modification process
  • phosphate-containing compound metabolic process
  • protein metabolic process
  • positive regulation of protein phosphorylation
  • protein modification process
  • protein phosphorylation
  • phosphorylation
  • regulation of protein metabolic process
  • macromolecule modification
  • regulation of phosphorylation
  • T-helper 1 cell activation
  • double-strand break repair
  • defense response to bacterium
  • male-specific defense response to bacterium
  • response to interleukin-7
  • cellular response to interleukin-7
  • double-strand break repair via nonhomologous end joining
  • somatic cell DNA recombination
  • DNA recombination
  • V(D)J recombination
  • somatic diversification of immune receptors via germline recombination within a single locus
  • somatic diversification of immune receptors
  • sex determination
  • male sex determination
  • reproductive process
  • developmental process involved in reproduction
  • regulation of gonad development
  • regulation of reproductive process
  • sex differentiation
  • male gonad development
  • male sex differentiation
  • development of primary male sexual characteristics
  • development of primary sexual characteristics
  • positive regulation of male gonad development
  • reproductive structure development
  • regulation of male gonad development
  • positive regulation of reproductive process
  • gonad development
  • reproductive system development
  • positive regulation of gonad development
  • cellular anatomical structure
  • intracellular anatomical structure
  • cytoplasm
  • cytosol
  • cell periphery
  • protein-containing complex
  • plasma membrane protein complex
  • membrane
  • plasma membrane
  • membrane protein complex
  • alphav-beta3 integrin-HMGB1 complex
  • intracellular organelle
  • organelle
  • membraneless organelle
  • cellular anatomical structure
  • intracellular anatomical structure
  • cytoplasm
  • cytosol
  • cell periphery
  • protein-containing complex
  • plasma membrane protein complex
  • membrane
  • plasma membrane
  • membrane protein complex
  • alphav-beta3 integrin-HMGB1 complex
  • intracellular organelle
  • organelle
  • membraneless organelle
  • intracellular membraneless organelle
  • chromosome
  • cell surface
  • membrane microdomain
  • membrane raft
  • extracellular region
  • chromatin
  • cell projection
  • neuron projection
  • plasma membrane bounded cell projection
  • membrane-bounded organelle
  • endoplasmic reticulum-Golgi intermediate compartment
  • intracellular membrane-bounded organelle
  • condensed chromosome
  • nucleus
  • membrane-enclosed lumen
  • intracellular organelle lumen
  • nucleoplasm
  • organelle lumen
  • nuclear lumen
  • early endosome
  • endosome
  • intracellular vesicle
  • endomembrane system
  • cytoplasmic vesicle
  • vesicle
  • transcription regulator complex
  • transcription repressor complex
  • endoplasmic reticulum
  • nuclear speck
  • ribonucleoprotein granule
  • nuclear body
  • supramolecular complex
  • nuclear ribonucleoprotein granule
B [auth C]5'-D(*GP*CP*AP*TP*TP*GP*TP*TP*TP*AP*GP*AP*TP*CP*CP*C)-3'---
A [auth B]5'-D(*GP*GP*GP*AP*TP*CP*TP*AP*AP*AP*CP*AP*AP*TP*GP*C)-3'---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth A]IPR036910High mobility group box domain superfamilyHomologous Superfamily
C [auth A]IPR050342High Mobility Group Box (HMGB)Family
C [auth A]IPR017967HMG box A DNA-binding domain, conserved siteConserved Site
C [auth A]IPR009071High mobility group box domainDomain
C [auth A]IPR050140SRY-related HMG-box transcription factor-likeFamily
C [auth A]IPR017253Transcription factor SRYFamily
C [auth A]IPR009071High mobility group box domainDomain
C [auth A]IPR036910High mobility group box domain superfamilyHomologous Superfamily
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